PDB entry 4hnz

View 4hnz on RCSB PDB site
Description: Crystal structure of eukaryotic HslV from Trypanosoma brucei
Class: hydrolase
Keywords: mitochondria, HYDROLASE
Deposited on 2012-10-22, released 2013-07-10
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-08-28, with a file datestamp of 2013-08-23.
Experiment type: XRAY
Resolution: 2.39 Å
R-factor: 0.219
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnza_
  • Chain 'B':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzb_
  • Chain 'C':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzc_
  • Chain 'D':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzd_
  • Chain 'E':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnze_
  • Chain 'F':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzf_
  • Chain 'G':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzg_
  • Chain 'H':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzh_
  • Chain 'I':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzi_
  • Chain 'J':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzj_
  • Chain 'K':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzk_
  • Chain 'L':
    Compound: HslVU complex proteolytic subunit, putative
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb11.01.2000
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q383Q5 (0-172)
      • conflict (172)
      • expression tag (173)
    Domains in SCOPe 2.03: d4hnzl_
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4hnzA (A:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzA (A:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4hnzB (B:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzB (B:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4hnzC (C:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzC (C:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4hnzD (D:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzD (D:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4hnzE (E:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzE (E:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4hnzF (F:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzF (F:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4hnzG (G:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzG (G:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4hnzH (H:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzH (H:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >4hnzI (I:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzI (I:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >4hnzJ (J:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzJ (J:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >4hnzK (K:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzK (K:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >4hnzL (L:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevlehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4hnzL (L:)
    ttilsvrkgdtvvllgdrqvtlgerivakssacklrrinddvvigfagstadaislmekl
    enkigefpnqltraavelakewrtdralrrleaslivcsaeetleidgqgnvitpeadgi
    vaigsggtfakaaaralidvdgydaekiarkamriatdidvfsnehwdvevleh