PDB entry 4hgm

View 4hgm on RCSB PDB site
Description: Shark IgNAR Variable Domain
Class: immune system
Keywords: Ig-fold, human albumin, V-nar, IMMUNE SYSTEM
Deposited on 2012-10-08, released 2013-05-08
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-07-03, with a file datestamp of 2013-06-28.
Experiment type: XRAY
Resolution: 2.34 Å
R-factor: 0.223
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Shark V-NAR
    Species: Squalus acanthias [TaxId:7797]
    Database cross-references and differences (RAF-indexed):
    • PDB 4HGM (0-End)
    Domains in SCOPe 2.04: d4hgma_
  • Chain 'B':
    Compound: serum albumin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4hgmb1, d4hgmb2, d4hgmb3
  • Heterogens: EDO, ACE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4hgmA (A:)
trvdqspsslsasvgdrvtitcvltdtsyplystywyqqkpgssnkeqisisgrysesvn
kgtksftltisslqpedfatyycramgtniwtgdgagtkveikaaahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4hgmA (A:)
trvdqspsslsasvgdrvtitcvltdtsyplystywyqqkpgssnkeqisisgrysesvn
kgtksftltisslqpedfatyycramgtniwtgdgagtkveik

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4hgmB (B:)
dahksevahrfkdlgeenfkalvliafaqylqqcpfedhvklvnevtefaktcvadesae
ncdkslhtlfgdklctvatlretygemadccakqepernecflqhkddnpnlprlvrpev
dvmctafhdneetflkkylyeiarrhpyfyapellffakrykaafteccqaadkaacllp
kldelrdegkassakqrlkcaslqkfgerafkawavarlsqrfpkaefaevsklvtdltk
vhtecchgdllecaddradlakyicenqdsissklkeccekpllekshciaevendempa
dlpslaadfveskdvcknyaeakdvflgmflyeyarrhpdysvvlllrlaktyettlekc
caaadphecyakvfdefkplveepqnlikqncelfeqlgeykfqnallvrytkkvpqvst
ptlvevsrnlgkvgskcckhpeakrmpcaedylsvvlnqlcvlhektpvsdrvtkcctes
lvnrrpcfsalevdetyvpkefnaetftfhadictlsekerqikkqtalvelvkhkpkat
keqlkavmddfaafvekcckaddketcfaeegkklvaasqaalgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4hgmB (B:)
ksevahrfkdlgeenfkalvliafaqylqqcpfedhvklvnevtefaktcvadesaencd
kslhtlfgdklctvaemadccakqepernecflqhkddnpnlprlvrpevdvmctafhdn
eetflkkylyeiarrhpyfyapellffakrykaafteccqaadkaacllpkldelrdegk
assakqrlkcaslqkfgerafkawavarlsqrfpkaefaevsklvtdltkvhtecchgdl
lecaddradlakyicenqdsissklkeccekpllekshciaevendempadlpslaadfv
eskdvcknyaeakdvflgmflyeyarrhpdysvvlllrlaktyettlekccaaadphecy
akvfdefkplveepqnlikqncelfeqlgeyqnallvrytkkvpqvstptlvevsrnlgk
vgskcckhpeakrmpcaedylsvvlnqlcvlhektpvsdrvtkccslvnrrpcfsale