PDB entry 4h88
View 4h88 on RCSB PDB site
Description: Structure of POM1 FAB fragment complexed with mouse PrPc Fragment 120-230
Class: immune system
Keywords: C-term mouse prion protein, POM1 FAB, IMMUNE SYSTEM
Deposited on
2012-09-21, released
2013-07-31
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-09-18, with a file datestamp of
2013-09-13.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.201
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: major prion protein
Species: Mus musculus [TaxId:10090]
Gene: Prnp, Prn-p, Prp
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4h88a_ - Chain 'H':
Compound: pom1 fab chain h
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: pom1 fab chain l
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4h88l1, d4h88l2 - Heterogens: NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4h88A (A:)
vvgglggymlgsamsrpmihfgndwedryyrenmyrypnqvyyrpvdqysnqnnfvhdcv
nitikqhtvvtttkgenftetdvkmmervveqmcvtqyqkesqayydgrrs
Sequence, based on observed residues (ATOM records): (download)
>4h88A (A:)
lggymlgsamsrpmihfgndwedryyrenmyrypnqvyyrpvdqysnqnnfvhdcvniti
kqhtvvtttkgenftetdvkmmervveqmcvtqyqkesqayy
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>4h88L (L:)
divltqspailsvspgervsfscrasqnigtsihwyqqrtnesprliikyasesisgips
rfsgsgsgtdftlsinsvesediadyycqqsntwpytfgggtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysmsstlt
ltkdeyerhntytceathktstspivksfnrne