PDB entry 4gph

View 4gph on RCSB PDB site
Description: Structure of HmuO, heme oxygenase from Corynebacterium diphtheriae, in complex with the putative reaction intermediates between Fe3+-biliverdin and biliverdin (data set IV)
Class: Oxidoreductase
Keywords: helix, heme degradation, heme, Oxidoreductase
Deposited on 2012-08-21, released 2013-08-21
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-08-21, with a file datestamp of 2013-08-16.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.169
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Heme oxygenase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gpha_
  • Chain 'B':
    Compound: Heme oxygenase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gphb_
  • Chain 'C':
    Compound: Heme oxygenase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4gphc_
  • Heterogens: FE, BLA, SO4, ASC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gphA (A:)
mttataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqav
davrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnv
dgpalvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyrekl
nnlelsdeqrehllkeatdafvfnhqvfadlgkgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gphA (A:)
taglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqavdavr
asgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnvdgpa
lvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyreklnnle
lsdeqrehllkeatdafvfnhqvfadlgk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gphB (B:)
mttataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqav
davrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnv
dgpalvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyrekl
nnlelsdeqrehllkeatdafvfnhqvfadlgkgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gphB (B:)
glavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqavdavras
gfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnvdgpalv
ahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyreklnnlels
deqrehllkeatdafvfnhqvfadlgkgl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4gphC (C:)
mttataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqav
davrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnv
dgpalvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyrekl
nnlelsdeqrehllkeatdafvfnhqvfadlgkgl

    Sequence, based on observed residues (ATOM records): (download) 
    >4gphC (C:)
tataglavelkqstaqahekaehstfmsdllkgrlgvaeftrlqeqawlfytaleqavda
vrasgfaeslldpalnraevlardldklngssewrsritaspavidyvnrleeirdnvdg
palvahhyvrylgdlsggqviarmmqrhygvdpealgfyhfegiaklkvykdeyreklnn
lelsdeqrehllkeatdafvfnhqvfadlgkg