PDB entry 4gmw

View 4gmw on RCSB PDB site
Description: Structure of rat cytosolic PEPCK Ld_1g in complex with PEP and GDP
Class: lyase
Keywords: kinase, gluconeogenesis, LYASE
Deposited on 2012-08-16, released 2013-07-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07379 (Start-462)
    • Uniprot P07379 (464-611)
      • linker (463)
    Domains in SCOPe 2.08: d4gmwa1, d4gmwa2
  • Heterogens: GDP, MN, NA, PEP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gmwA (A:)
mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
qeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmsee
dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
espegvpiegiifggrrpagvplvyealswqhgvfvgaamrsegimhdpfamrpffgynf
gkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsa
kltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeier
elralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >4gmwA (A:)
ppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmq
eegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseed
fekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvl
ealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsll
gkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlp
gwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnva
etsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawe
spegvpiegiifggrrpagvplvyealswqhgvfvgaamrsegimhdpfamrpffgynfg
kylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsak
ltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeiere
lralkqrisqm