PDB entry 4gkz
View 4gkz on RCSB PDB site
Description: HA1.7, a MHC class II restricted TCR specific for haemagglutinin
Class: immune system
Keywords: Major histocompatibility complex class II (pMHC-II), T-cell, T-cell receptor (TCR), influenza, HA1.7, IMMUNE SYSTEM
Deposited on
2012-08-13, released
2012-11-07
The last revision prior to the SCOPe 2.03 freeze date was dated
2012-11-07, with a file datestamp of
2012-11-02.
Experiment type: XRAY
Resolution: 2.39 Å
R-factor: 0.251
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Alpha chain of Class II TCR
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4gkza1, d4gkza2 - Chain 'B':
Compound: Beta Chain of Class II TCR
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4gkzb1, d4gkzb2 - Heterogens: EDO, SO4, TAM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4gkzA (A:)
mqsvtqlgshvsvsegalvllrcnysssvppylfwyvqypnqglqlllkytsaatlvkgi
ngfeaefkksetsfhltkpsahmsdaaeyfcavsespfgnekltfgtgtrltiipniqnp
dpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaw
snksdfacanafnnsiipedtf
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4gkzB (B:)
vkvtqssrylvkrtgekvflecvqdmdhenmfwyrqdpglglrliyfsydvkmkekgdip
egysvsrekkerfslilesastnqtsmylcassstglpygytfgsgtrltvvedlnkvfp
pevavfepseaeishtqkatlvclatgffpdhvelswwvngkevhsgvctdpqplkeqpa
lndsryslssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
a