PDB entry 4gee

View 4gee on RCSB PDB site
Description: Pyrrolopyrimidine inhibitors of DNA gyrase B and topoisomerase IV, part I: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
Class: Isomerase/Isomerase inhibitor
Keywords: ATP-binding, Nucleotide-binding, Topoisomerase, ATP-binding domain, DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, Isomerase-Isomerase inhibitor complex
Deposited on 2012-08-01, released 2013-02-13
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-02-27, with a file datestamp of 2013-02-22.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.174
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA gyrase subunit b
    Species: Enterococcus faecalis [TaxId:226185]
    Gene: gyrB, EF_0005
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q839Z1 (0-206)
      • expression tag (207-209)
    Domains in SCOPe 2.06: d4geea1, d4geea2
  • Heterogens: 0WT, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4geeA (A:)
    gleavrkrpgmyigstsgeglhhlvweivdnsidealagfaksiqviiepddsitviddg
    rgipvgiqaktgrpavetvftvlhaggkfggggykvsgglhgvgssvvnalstsldvrvy
    kdgkvyyqeyrrgavvddlkvieetdrhgttvhfipdpeiftettvydfdklatrvrela
    flnrglhisiedrregqedkkeyhyeglehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4geeA (A:)
    gleavrkrpgmyigstsgeglhhlvweivdnsidealagfaksiqviiepddsitviddg
    rgipvgiqaktgrpavetvftvlhgvgssvvnalstsldvrvykdgkvyyqeyrrgavvd
    dlkvieetdrhgttvhfipdpeiftettvydfdklatrvrelaflnrglhisiedrregq
    edkkeyhyegleh