PDB entry 4gdj

View 4gdj on RCSB PDB site
Description: A subtype N10 neuraminidase-like protein of A/little yellow-shouldered bat/Guatemala/060/2010
Class: viral protein
Keywords: influenza virus, neuraminidase-like, n10, beta propeller, ectodomain, viral protein
Deposited on 2012-07-31, released 2012-09-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neuraminidase
    Species: Influenza A virus [TaxId:1129347]
    Gene: NA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gdja_
  • Chain 'B':
    Compound: Neuraminidase
    Species: Influenza A virus [TaxId:1129347]
    Gene: NA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gdjb_
  • Chain 'C':
    Compound: Neuraminidase
    Species: Influenza A virus [TaxId:1129347]
    Gene: NA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gdjc_
  • Chain 'D':
    Compound: Neuraminidase
    Species: Influenza A virus [TaxId:1129347]
    Gene: NA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4gdjd_
  • Heterogens: NAG, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4gdjA (A:)
gspsrkfywkarsqmcevkgwvpthrgfpwgpelpgdlilsrrayvscdltscfkffiay
glsanqhllntsmeweeslyktpigsantlstsemilpgrsssacfdglkwtvlvsngrd
rnsfimikygeeitdtfsasrggplrlpnsecicvegscfvlvsdgpnvnqsvhriyelq
ngtvqrwkqlnttginfeystcytinnlikctgtnlwndakrpllrftkdlnyqivepcn
gaptdfprgglttpsckmaqekgeggiqgfildekpawtsktktelsqngfvleqipdgi
esegtvslsyelfsnkrtgrsgffqpkgdlisecqrvcfwleiedqtvglgmiqelstfc
ginspvqninwds

    Sequence, based on observed residues (ATOM records): (download) 
    >4gdjA (A:)
mcevkgwvpthrdlilsrrayvscdltscfkffiayglsaeeslyktpigsantlstsem
ilpgrsssacfdglkwtvlvsngrdrnsfimikygeeitdtfsasrggplrlpnsecicv
egscfvlvsdgpnvnqsvhriyelqngtvqrwkqlnttginfeystcytinnlikctgtn
lwndakrpllrftkdlnyqivepcngaptdfprgglttpsckmaqekgeggiqgfildek
pawtsktktelsqngfvleqipdgiesegtvslsyelfsnkrtgrsgffqpkgecqrvcf
wleieiqelstfcgins

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4gdjB (B:)
gspsrkfywkarsqmcevkgwvpthrgfpwgpelpgdlilsrrayvscdltscfkffiay
glsanqhllntsmeweeslyktpigsantlstsemilpgrsssacfdglkwtvlvsngrd
rnsfimikygeeitdtfsasrggplrlpnsecicvegscfvlvsdgpnvnqsvhriyelq
ngtvqrwkqlnttginfeystcytinnlikctgtnlwndakrpllrftkdlnyqivepcn
gaptdfprgglttpsckmaqekgeggiqgfildekpawtsktktelsqngfvleqipdgi
esegtvslsyelfsnkrtgrsgffqpkgdlisecqrvcfwleiedqtvglgmiqelstfc
ginspvqninwds

    Sequence, based on observed residues (ATOM records): (download) 
    >4gdjB (B:)
mcevkgwvpthrpgdlilsrrayvscdltscfkffiayglseeslyktpigsantlstse
milpgrsssacfdglkwtvlvsngrdrnsfimikygeeitdtfsasrggplrlpnsecic
vegscfvlvsdgpnvnqsvhriyelqngtvqrwkqlnttginfeystcytinnlikctgt
nlwndakrpllrftkdlnyqivepcngaptdfprgglttpsckmaqekgeggiqgfilde
kpawtsktktelsqngfvleqipdgiesegtvslsyelfsnkrtgrsgffqpkgecqrvc
fwleieiqelstfcginspvq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4gdjC (C:)
gspsrkfywkarsqmcevkgwvpthrgfpwgpelpgdlilsrrayvscdltscfkffiay
glsanqhllntsmeweeslyktpigsantlstsemilpgrsssacfdglkwtvlvsngrd
rnsfimikygeeitdtfsasrggplrlpnsecicvegscfvlvsdgpnvnqsvhriyelq
ngtvqrwkqlnttginfeystcytinnlikctgtnlwndakrpllrftkdlnyqivepcn
gaptdfprgglttpsckmaqekgeggiqgfildekpawtsktktelsqngfvleqipdgi
esegtvslsyelfsnkrtgrsgffqpkgdlisecqrvcfwleiedqtvglgmiqelstfc
ginspvqninwds

    Sequence, based on observed residues (ATOM records): (download) 
    >4gdjC (C:)
mcevkgwvpthrdlilsrrayvscdltscfkffiayglseslyktpigsantlstsemil
pgrsssacfdglkwtvlvsngrdrnsfimikygeeitdtfsasrggplrlpnsecicveg
scfvlvsdgpnvnqsvhriyelqngtvqrwkqlnttginfeystcytinnlikctgtnlw
ndakrpllrftkdlnyqivepcngaptdfprgglttpsckmaqekgeggiqgfildekpa
wtsktktelsqngfvleqipdgiesegtvslsyelfsnkrtgrsgffqpkgecqrvcfwl
eieqelstfcgins

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4gdjD (D:)
gspsrkfywkarsqmcevkgwvpthrgfpwgpelpgdlilsrrayvscdltscfkffiay
glsanqhllntsmeweeslyktpigsantlstsemilpgrsssacfdglkwtvlvsngrd
rnsfimikygeeitdtfsasrggplrlpnsecicvegscfvlvsdgpnvnqsvhriyelq
ngtvqrwkqlnttginfeystcytinnlikctgtnlwndakrpllrftkdlnyqivepcn
gaptdfprgglttpsckmaqekgeggiqgfildekpawtsktktelsqngfvleqipdgi
esegtvslsyelfsnkrtgrsgffqpkgdlisecqrvcfwleiedqtvglgmiqelstfc
ginspvqninwds

    Sequence, based on observed residues (ATOM records): (download) 
    >4gdjD (D:)
cevkgwvpthrdlilsrrayvscdltscfkffiayglseslyktpigsantlstsemilp
grsssacfdglkwtvlvsngrdrnsfimikygeeitdtfsasrggplrlpnsecicvegs
cfvlvsdgpnvnqsvhriyelqngtvqrwkqlnttginfeystcytinnlikctgtnlwn
dakrpllrftkdlnyqivepcngaptdfprgglttpsckmaqekgeggiqgfildekpaw
tsktktelsqngfvleqipdgiesegtvslsyelfsnkrtgrsgffqpkgecqrvcfwle
ieiqelstfcgins