PDB entry 4g01
View 4g01 on RCSB PDB site
Description: ARA7-GDP-Ca2+/VPS9a
Class: transport protein
Keywords: GTPase-GDP-metal-GEF complex, vps9 domain, Ras super family, guanine nucleotide exchange factor, small GTPase, GDP/GTP binding, divalent metal binding, geranylgeranylation, TRANSPORT PROTEIN
Deposited on
2012-07-09, released
2013-02-27
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-08-07, with a file datestamp of
2013-08-02.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.202
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Vacuolar protein sorting-associated protein 9A
Species: Arabidopsis thaliana [TaxId:3702]
Gene: VPS9A
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Ras-related protein RABF2b
Species: Arabidopsis thaliana [TaxId:3702]
Gene: ARA-7
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4g01b_ - Heterogens: CA, GDP, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4g01B (B:)
gsmaaagnksinaklvllgdvgagksslvlrfvkdqfvefqestigaaffsqtlavndat
vkfeiwdtagqeryhslapmyyrgaaaaiivfdvtnqasferakkwvqelqaqgnpnmvm
alagnksdlldarkvtaedaqtyaqenglffmetsaktatnvkeifyeiarrlprvqpte
n
Sequence, based on observed residues (ATOM records): (download)
>4g01B (B:)
sinaklvllgdvgagksslvlrfvkdqfvefqestigaaffsqtlavndatvkfeiwdta
gqeryhslapmyyrgaaaaiivfdvtnqasferakkwvqelqaqgnpnmvmalagnksdl
ldarkvtaedaqtyaqenglffmetsaktatnvkeifyeiarrlp