PDB entry 4fl4
View 4fl4 on RCSB PDB site
Description: Scaffoldin conformation and dynamics revealed by a ternary complex from the Clostridium thermocellum cellulosome
Class: protein binding
Keywords: Structural Genomics, Montreal-Kingston Bacterial Structural Genomics Initiative, BSGI, cohesin, dockerin, X module, cell surface, hydrolase, PROTEIN BINDING
Deposited on
2012-06-14, released
2012-06-27
The last revision prior to the SCOPe 2.08 freeze date was dated
2012-08-22, with a file datestamp of
2012-08-17.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.193
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glycoside hydrolase family 9
Species: Clostridium thermocellum [TaxId:1515]
Gene: Cther_2220
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4a1, d4fl4a2 - Chain 'B':
Compound: scaffolding dockerin binding protein a
Species: Clostridium thermocellum [TaxId:1515]
Gene: SdbA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4b_ - Chain 'C':
Compound: Cellulosome anchoring protein cohesin region
Species: Clostridium thermocellum [TaxId:1515]
Gene: ClothDRAFT_2952
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Glycoside hydrolase family 9
Species: Clostridium thermocellum [TaxId:1515]
Gene: Cther_2220
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4d1, d4fl4d2 - Chain 'E':
Compound: scaffolding dockerin binding protein a
Species: Clostridium thermocellum [TaxId:1515]
Gene: SdbA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4e_ - Chain 'F':
Compound: Cellulosome anchoring protein cohesin region
Species: Clostridium thermocellum [TaxId:1515]
Gene: ClothDRAFT_2952
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Glycoside hydrolase family 9
Species: Clostridium thermocellum [TaxId:1515]
Gene: Cther_2220
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4g1, d4fl4g2 - Chain 'H':
Compound: scaffolding dockerin binding protein a
Species: Clostridium thermocellum [TaxId:1515]
Gene: SdbA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4h_ - Chain 'I':
Compound: Cellulosome anchoring protein cohesin region
Species: Clostridium thermocellum [TaxId:1515]
Gene: ClothDRAFT_2952
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: Glycoside hydrolase family 9
Species: Clostridium thermocellum [TaxId:1515]
Gene: Cther_2220
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4j1, d4fl4j2 - Chain 'K':
Compound: scaffolding dockerin binding protein a
Species: Clostridium thermocellum [TaxId:1515]
Gene: SdbA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4fl4k_ - Chain 'L':
Compound: Cellulosome anchoring protein cohesin region
Species: Clostridium thermocellum [TaxId:1515]
Gene: ClothDRAFT_2952
Database cross-references and differences (RAF-indexed):
- Heterogens: CA, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4fl4A (A:)
mghhhhhhhhhhssghiegrhmgdvnddgkvnstdltllkryvlkavstlpsskaeknad
vnrdgrvnssdvtilsrylirvieklpi
Sequence, based on observed residues (ATOM records): (download)
>4fl4A (A:)
hmgdvnddgkvnstdltllkryvlkavstlpsskaeknadvnrdgrvnssdvtilsryli
rvieklpi
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4fl4B (B:)
mrgshhhhhhtdlradkassielkfdrnkgevgdiligtvrinniknfagfqvnivydpk
vlmavdpetgkeftsstfppgrtvlknnaygpiqiadndpekgilnfalaysyiagyket
gvaeesgiiakigfkilqkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvl
slgdepf
Sequence, based on observed residues (ATOM records): (download)
>4fl4B (B:)
assielkfdrnkgevgdiligtvrinniknfagfqvnivydpkvlmavdpetgkeftsst
fppgrtvlknnaygpiqiadndpekgilnfalaysyiagyketgvaeesgiiakigfkil
qkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvlsl
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4fl4D (D:)
mghhhhhhhhhhssghiegrhmgdvnddgkvnstdltllkryvlkavstlpsskaeknad
vnrdgrvnssdvtilsrylirvieklpi
Sequence, based on observed residues (ATOM records): (download)
>4fl4D (D:)
mgdvnddgkvnstdltllkryvlkavstlpsskaeknadvnrdgrvnssdvtilsrylir
viekl
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4fl4E (E:)
mrgshhhhhhtdlradkassielkfdrnkgevgdiligtvrinniknfagfqvnivydpk
vlmavdpetgkeftsstfppgrtvlknnaygpiqiadndpekgilnfalaysyiagyket
gvaeesgiiakigfkilqkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvl
slgdepf
Sequence, based on observed residues (ATOM records): (download)
>4fl4E (E:)
assielkfdrnkgevgdiligtvrinniknfagfqvnivydpkvlmavdpetgkeftsst
fppgrtvlknnaygpiqiadndpekgilnfalaysyiagyketgvaeesgiiakigfkil
qkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvlsl
- Chain 'F':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>4fl4G (G:)
mghhhhhhhhhhssghiegrhmgdvnddgkvnstdltllkryvlkavstlpsskaeknad
vnrdgrvnssdvtilsrylirvieklpi
Sequence, based on observed residues (ATOM records): (download)
>4fl4G (G:)
hmgdvnddgkvnstdltllkryvlkavstlpsskaeknadvnrdgrvnssdvtilsryli
rvieklp
- Chain 'H':
Sequence, based on SEQRES records: (download)
>4fl4H (H:)
mrgshhhhhhtdlradkassielkfdrnkgevgdiligtvrinniknfagfqvnivydpk
vlmavdpetgkeftsstfppgrtvlknnaygpiqiadndpekgilnfalaysyiagyket
gvaeesgiiakigfkilqkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvl
slgdepf
Sequence, based on observed residues (ATOM records): (download)
>4fl4H (H:)
assielkfdrnkgevgdiligtvrinniknfagfqvnivydpkvlmavdpetgkeftsst
fppgrtvlknnaygpiqiadndpekgilnfalaysyiagyketgvaeesgiiakigfkil
qkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvlsl
- Chain 'I':
No sequence available.
- Chain 'J':
Sequence, based on SEQRES records: (download)
>4fl4J (J:)
mghhhhhhhhhhssghiegrhmgdvnddgkvnstdltllkryvlkavstlpsskaeknad
vnrdgrvnssdvtilsrylirvieklpi
Sequence, based on observed residues (ATOM records): (download)
>4fl4J (J:)
hmgdvnddgkvnstdltllkryvlkavstlpsskaeknadvnrdgrvnssdvtilsryli
rviekl
- Chain 'K':
Sequence, based on SEQRES records: (download)
>4fl4K (K:)
mrgshhhhhhtdlradkassielkfdrnkgevgdiligtvrinniknfagfqvnivydpk
vlmavdpetgkeftsstfppgrtvlknnaygpiqiadndpekgilnfalaysyiagyket
gvaeesgiiakigfkilqkkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvl
slgdepf
Sequence, based on observed residues (ATOM records): (download)
>4fl4K (K:)
assielkfdrkgevgdiligtvrinniknfagfqvnivydpkvlmavdpetgkeftsstf
ppgrtvlknnaygpiqiadndpekgilnfalaysyiagyketgvaeesgiiakigfkilq
kkstavkfqdtlsmpgaisgtqlfdwdgevitgyeviqpdvlsl
- Chain 'L':
No sequence available.