PDB entry 4f15

View 4f15 on RCSB PDB site
Description: Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Class: immune system
Keywords: influenza virus, haemagglutinin, conformation, antibody, IMMUNE SYSTEM
Deposited on 2012-05-06, released 2013-05-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-05-15, with a file datestamp of 2013-05-10.
Experiment type: XRAY
Resolution: 2.81 Å
R-factor: 0.235
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:644289]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Fab fragment, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15 (0-218)
  • Chain 'C':
    Compound: Fab fragment, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15
    Domains in SCOPe 2.06: d4f15c1, d4f15c2
  • Chain 'D':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:644289]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Fab fragment, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15 (0-218)
  • Chain 'F':
    Compound: Fab fragment, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15
    Domains in SCOPe 2.06: d4f15f1, d4f15f2
  • Chain 'G':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:644289]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Fab fragment, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15 (0-218)
  • Chain 'I':
    Compound: Fab fragment, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15
    Domains in SCOPe 2.06: d4f15i1, d4f15i2
  • Chain 'J':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:644289]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Fab fragment, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15 (0-218)
  • Chain 'L':
    Compound: Fab fragment, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4F15
    Domains in SCOPe 2.06: d4f15l1, d4f15l2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4f15C (C:)
    diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
    gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvs
    ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
    stltltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >4f15C (C:)
    iqmtqspaslavspgqratitcrasesvsnfinwfqqkpgqppklliytasnkgtgvpar
    fsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvsifpps
    seqltsgasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsstltlye
    rhnsytceathktstspivksfn
    

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4f15F (F:)
    diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
    gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvs
    ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
    stltltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >4f15F (F:)
    iqmtqspaslavspgqratitcrasesvsnfinwfqqkpgqppklliytasnkgtgvpar
    fsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvsifpps
    seqltsgasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsstltlye
    rhnsytceathktstspivksfn
    

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >4f15I (I:)
    diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
    gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvs
    ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
    stltltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >4f15I (I:)
    iqmtqspaslavspgqratitcrasesvsnfinwfqqkpgqppklliytasnkgtgvpar
    fsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvsifpps
    seqltsgasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsstltlye
    rhnsytceathktstspivksfn
    

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >4f15L (L:)
    diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
    gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvs
    ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
    stltltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >4f15L (L:)
    iqmtqspaslavspgqratitcrasesvsnfinwfqqkpgqppklliytasnkgtgvpar
    fsgsgsgtdftltinpveaedtanyfcqqtkevpygtfggtkleikradaaptvsifpps
    seqltsgasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsstltlye
    rhnsytceathktstspivksfn