PDB entry 4emk
View 4emk on RCSB PDB site
Description: Crystal structure of SpLsm5/6/7
Class: RNA binding protein
Keywords: Sm fold, mRNA decay and pre-mRNA splicing, Lsm proteins, RNA BINDING PROTEIN
Deposited on
2012-04-12, released
2012-06-13
The last revision prior to the SCOPe 2.03 freeze date was dated
2012-06-13, with a file datestamp of
2012-06-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.232
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: U6 snRNA-associated Sm-like protein LSm5
Species: Schizosaccharomyces pombe [TaxId:284812]
Gene: lsm5, SPBC20F10.09
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4emka_ - Chain 'B':
Compound: U6 snRNA-associated Sm-like protein LSm6
Species: Schizosaccharomyces pombe [TaxId:284812]
Gene: lsm6, SPAC2F3.17c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4emkb_ - Chain 'C':
Compound: U6 snRNA-associated Sm-like protein LSm7
Species: Schizosaccharomyces pombe [TaxId:284812]
Gene: lsm7, SPCC285.12
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4emkA (A:)
mgsshhhhhhsqdpmsmtilplelidkcigsnlwvimkserefagtlvgfddyvnivlkd
vteydtvtgvtekhsemllngngmcmlipggkpe
Sequence, based on observed residues (ATOM records): (download)
>4emkA (A:)
lplelidkcigsnlwvimkserefagtlvgfddyvnivlkdvteydtvtgvtekhsemll
ngngmcmlipgg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4emkB (B:)
mdsspneflnkvigkkvlirlssgvdykgilscldgymnlalerteeyvngkktnvygda
firgnnvlyvsaldd
Sequence, based on observed residues (ATOM records): (download)
>4emkB (B:)
mdsspneflnkvigkkvlirlssgvdykgilscldgymnlalerteeyvngkktnvygda
firgnnvlyvsal
- Chain 'C':
No sequence available.