PDB entry 4ei6
View 4ei6 on RCSB PDB site
Description: Structure of XV19 Valpha1-Vbeta16 Type-II Natural Killer T cell receptor
Class: immune system
Keywords: Natural Killer T cell receptor, IMMUNE SYSTEM
Deposited on
2012-04-04, released
2012-07-25
The last revision prior to the SCOPe 2.06 freeze date was dated
2012-09-05, with a file datestamp of
2012-08-31.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.209
AEROSPACI score: 0.56
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Valpha1 XV19 Type II Natural Killer T cell receptor (mouse variable domain, human constant domain)
Species: Mus musculus, Homo sapiens [TaxId:10090, 9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ei6a1, d4ei6a2 - Chain 'B':
Compound: Vbeta16 XV19 Type II Natural Killer T cell receptor (mouse variable domain, human constant domain)
Species: Mus musculus, Homo sapiens [TaxId:10090, 9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ei6b1, d4ei6b2 - Chain 'C':
Compound: Valpha1 XV19 Type II Natural Killer T cell receptor (mouse variable domain, human constant domain)
Species: Mus musculus, Homo sapiens [TaxId:10090, 9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ei6c1, d4ei6c2 - Chain 'D':
Compound: Vbeta16 XV19 Type II Natural Killer T cell receptor (mouse variable domain, human constant domain)
Species: Mus musculus, Homo sapiens [TaxId:10090, 9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ei6d1, d4ei6d2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4ei6A (A:)
mqqkvqqspeslsvpeggmaslnctssdrnfqyfwwyrqhsgegpkalmsifsdgdkkeg
rftahlnkaslhvslhirdsqpsdsalyfcaaseqnnyaqgltfglgtrvsvfpyiqnpd
pavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaws
nksdfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>4ei6A (A:)
qkvqqspeslsvpeggmaslnctssdrnfqyfwwyrqhsgegpkalmsifsdgdkkegrf
tahlnkaslhvslhirdsqpsdsalyfcaaseqnnyaqgltfglgtrvsvfpyiqnpdpa
vyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnk
sdfacanafnnsiipedtffps
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4ei6B (B:)
mgpkvlqipshqiidmgqmvtlncdpvsnhlyfywykqilgqqmeflvnfyngkvmeksk
lfkdqfsverpdgsyftlkiqptaledsavyfcassfwgayaeqffgpgtrltvledlkn
vfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplke
qpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaea
wgrad
Sequence, based on observed residues (ATOM records): (download)
>4ei6B (B:)
mgpkvlqipshqiidmgqmvtlncdpvsnhlyfywykqilgqqmeflvnfyngkvmeksk
lfkdqfsverpdgsyftlkiqptaledsavyfcassfwgayaeqffgpgtrltvledlkn
vfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplke
qpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaea
wgra
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4ei6C (C:)
mqqkvqqspeslsvpeggmaslnctssdrnfqyfwwyrqhsgegpkalmsifsdgdkkeg
rftahlnkaslhvslhirdsqpsdsalyfcaaseqnnyaqgltfglgtrvsvfpyiqnpd
pavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaws
nksdfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>4ei6C (C:)
qkvqqspeslsvpeggmaslnctssdrnfqyfwwyrqhsgegpkalmsifsdgdkkegrf
tahlnkaslhvslhirdsqpsdsalyfcaaseqnnyaqgltfglgtrvsvfpyipdpavy
qlrdssvclftdfdsqtnvsqssdvyitdkcvldmrsmdfksnsavawsnfacanafnns
iipedtffp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4ei6D (D:)
mgpkvlqipshqiidmgqmvtlncdpvsnhlyfywykqilgqqmeflvnfyngkvmeksk
lfkdqfsverpdgsyftlkiqptaledsavyfcassfwgayaeqffgpgtrltvledlkn
vfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplke
qpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaea
wgrad
Sequence, based on observed residues (ATOM records): (download)
>4ei6D (D:)
kvlqipshqiidmgqmvtlncdpvsnhlyfywykqilgqqmeflvnfyngkvmeksklfk
dqfsverpdgsyftlkiqptaledsavyfcassfwgayaeqffgpgtrltvledlknvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
lndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
a