PDB entry 4ebq
View 4ebq on RCSB PDB site
Description: Fab structure of anti-Vaccinia virus D8L antigen mouse IgG2a LA5
Class: immune system
Keywords: variable domain, constant domain, CDR, hypervariable region, neutralizing antibody, vaccinia virus, D8L envelope protein, conformational epitope, discontinuous epitope, D8L antigen binding, neutralizing mAb in presence of complement, D8L vaccinia envelope protein, papain treatment, IMMUNE SYSTEM
Deposited on
2012-03-23, released
2012-06-06
The last revision prior to the SCOPe 2.06 freeze date was dated
2012-07-25, with a file datestamp of
2012-07-20.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.2
AEROSPACI score: 0.57
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: anti-Vaccinia D8L antigen monoclonal IgG2a antibody LA5, heavy chain
Species: Mus musculus [TaxId:10090]
Gene: IgG2a, VAR-gene, heavy chain
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: anti-Vaccinia D8L antigen monoclonal IgG2a antibody LA5, light chain
Species: Mus musculus [TaxId:10090]
Gene: IgG2a, VAR-gene, light chain
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ebql1, d4ebql2 - Heterogens: GOL, CL, PO4, EDO, HOH
PDB Chain Sequences:
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4ebqL (L:)
qivltqspaimsafpgesvtmtcsasssvsymywyqqkpgssprlliydtsnlasgvpvr
fsgsgsgtsysltinrleaedgatyycqqwtsypltfgagtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathatstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4ebqL (L:)
qivltqspaimsafpgesvtmtcsasssvsymywyqqkpgssprlliydtsnlasgvpvr
fsgsgsgtsysltinrleaedgatyycqqwtsypltfgagtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathatspivksfnrnec