SCOPe 2.06: Structural Classification of Proteins

PDB entry 4e4j

View 4e4j on RCSB PDB site
Description: Crystal structure of arginine deiminase from Mycoplasma penetrans
Class: hydrolase
Keywords: arginine deiminase, L-arginine, L-citrulline, NH3, HYDROLASE
Deposited on 2012-03-13, released 2012-10-31
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-10-31, with a file datestamp of 2012-10-26.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.21
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4ja_
Chain 'B':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jb_
Chain 'C':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jc_
Chain 'D':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jd_
Chain 'E':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4je_
Chain 'F':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jf_
Chain 'G':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jg_
Chain 'H':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jh_
Chain 'I':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4ji_
Chain 'J':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jj_
Chain 'K':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jk_
Chain 'L':
Compound: Arginine deiminase
Species: Mycoplasma penetrans [TaxId:272633]
Gene: MYPE6080
Database cross-references and differences (RAF-indexed):
- Uniprot Q8EVF6 (Start-432)
Domains in SCOPe 2.06: d4e4jl_
Heterogens: CL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>4e4jA (A:)
mghhhhhhhhhhssghiddddkhmssidknslgnginvyseigelkevlvhtpgdeiryt
apsrleellfsavlkadtaieehkgfvkilqnngikviqlcdlvaetyelcskevrnsfi
eqyldealpvlkkeirpvvkdyllsfptvqmvrkmmsgilanelnikqdnpliidgmpnl
yftrdpfasmgngvsincmkyptrkrevifsrfvftnnpkykntpryfdivgnngtiegg
difiynsktlvignsertnfaaiesvakniqankdctferivvinvppmpnlmhldtwlt
mldydkflyspnmmnvlkiweidlnvkpvkfvekkgtleevlysiidkkpilipiagkga
nqldidiethfdgtnyltiapgvvvgyernektqkalveagikvlsfngsqlslgmgsar
cmsmplirenlkk