PDB entry 4e3q

View 4e3q on RCSB PDB site
Description: PMP-bound form of Aminotransferase crystal structure from Vibrio fluvialis
Class: transferase
Keywords: aminotransferase, TRANSFERASE
Deposited on 2012-03-10, released 2012-10-10
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-01-02, with a file datestamp of 2012-12-28.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.176
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyruvate transaminase
    Species: Vibrio fluvialis [TaxId:676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e3qa_
  • Chain 'B':
    Compound: Pyruvate transaminase
    Species: Vibrio fluvialis [TaxId:676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e3qb_
  • Chain 'C':
    Compound: Pyruvate transaminase
    Species: Vibrio fluvialis [TaxId:676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e3qc_
  • Chain 'D':
    Compound: Pyruvate transaminase
    Species: Vibrio fluvialis [TaxId:676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4e3qd_
  • Heterogens: NA, SO4, BEN, PMP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4e3qA (A:)
mgsshhhhhhssglvprgshmnkpqswearaetyslygftdmpslhqrgtvvvthgegpy
ivdvngrryldansglwnmvagfdhkglidaakaqyerfpgyhaffgrmsdqtvmlsekl
vevspfdsgrvfytnsgseandtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasm
tgkpynsvfglplpgfvhltcphywrygeegeteeqfvarlareleetiqregadtiagf
faepvmgaggvippakgyfqailpilrkydipvisdevicgfgrtgntwgcvtydftpda
iissknltagffpmgavilgpelskrletaieaieefphgftasghpvgcaialkaidvv
mneglaenvrrlaprfeerlkhiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvs
eriantctdlglicrplgqsvvlcppfilteaqmdemfdklekaldkvfaeva

    Sequence, based on observed residues (ATOM records): (download) 
    >4e3qA (A:)
nkpqswearaetyslygftdmpslhqrgtvvvthgegpyivdvngrryldansglwnmva
gfdhkglidaakaqyerfpgyhaffgrmsdqtvmlseklvevspfdsgrvfytnsgsean
dtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasmtgkpynsvfglplpgfvhltc
phywrygeegeteeqfvarlareleetiqregadtiagffaepvmgaggvippakgyfqa
ilpilrkydipvisdevicgfgrtgntwgcvtydftpdaiissknltagffpmgavilgp
elskrletaieaieefphgftasghpvgcaialkaidvvmneglaenvrrlaprfeerlk
hiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvseriantctdlglicrplgqsv
vlcppfilteaqmdemfdklekaldkvfaeva

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4e3qB (B:)
mgsshhhhhhssglvprgshmnkpqswearaetyslygftdmpslhqrgtvvvthgegpy
ivdvngrryldansglwnmvagfdhkglidaakaqyerfpgyhaffgrmsdqtvmlsekl
vevspfdsgrvfytnsgseandtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasm
tgkpynsvfglplpgfvhltcphywrygeegeteeqfvarlareleetiqregadtiagf
faepvmgaggvippakgyfqailpilrkydipvisdevicgfgrtgntwgcvtydftpda
iissknltagffpmgavilgpelskrletaieaieefphgftasghpvgcaialkaidvv
mneglaenvrrlaprfeerlkhiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvs
eriantctdlglicrplgqsvvlcppfilteaqmdemfdklekaldkvfaeva

    Sequence, based on observed residues (ATOM records): (download) 
    >4e3qB (B:)
pqswearaetyslygftdmpslhqrgtvvvthgegpyivdvngrryldansglwnmvagf
dhkglidaakaqyerfpgyhaffgrmsdqtvmlseklvevspfdsgrvfytnsgseandt
mvkmlwflhaaegkpqkrkiltrwnayhgvtavsasmtgkpynsvfglplpgfvhltcph
ywrygeegeteeqfvarlareleetiqregadtiagffaepvmgaggvippakgyfqail
pilrkydipvisdevicgfgrtgntwgcvtydftpdaiissknltagffpmgavilgpel
skrletaieaieefphgftasghpvgcaialkaidvvmneglaenvrrlaprfeerlkhi
aerpnigeyrgigfmwaleavkdkasktpfdgnlsvseriantctdlglicrplgqsvvl
cppfilteaqmdemfdklekaldkvfaeva

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4e3qC (C:)
mgsshhhhhhssglvprgshmnkpqswearaetyslygftdmpslhqrgtvvvthgegpy
ivdvngrryldansglwnmvagfdhkglidaakaqyerfpgyhaffgrmsdqtvmlsekl
vevspfdsgrvfytnsgseandtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasm
tgkpynsvfglplpgfvhltcphywrygeegeteeqfvarlareleetiqregadtiagf
faepvmgaggvippakgyfqailpilrkydipvisdevicgfgrtgntwgcvtydftpda
iissknltagffpmgavilgpelskrletaieaieefphgftasghpvgcaialkaidvv
mneglaenvrrlaprfeerlkhiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvs
eriantctdlglicrplgqsvvlcppfilteaqmdemfdklekaldkvfaeva

    Sequence, based on observed residues (ATOM records): (download) 
    >4e3qC (C:)
nkpqswearaetyslygftdmpslhqrgtvvvthgegpyivdvngrryldansglwnmva
gfdhkglidaakaqyerfpgyhaffgrmsdqtvmlseklvevspfdsgrvfytnsgsean
dtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasmtgkpynsvfglplpgfvhltc
phywrygeegeteeqfvarlareleetiqregadtiagffaepvmgaggvippakgyfqa
ilpilrkydipvisdevicgfgrtgntwgcvtydftpdaiissknltagffpmgavilgp
elskrletaieaieefphgftasghpvgcaialkaidvvmneglaenvrrlaprfeerlk
hiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvseriantctdlglicrplgqsv
vlcppfilteaqmdemfdklekaldkvfaev

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4e3qD (D:)
mgsshhhhhhssglvprgshmnkpqswearaetyslygftdmpslhqrgtvvvthgegpy
ivdvngrryldansglwnmvagfdhkglidaakaqyerfpgyhaffgrmsdqtvmlsekl
vevspfdsgrvfytnsgseandtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasm
tgkpynsvfglplpgfvhltcphywrygeegeteeqfvarlareleetiqregadtiagf
faepvmgaggvippakgyfqailpilrkydipvisdevicgfgrtgntwgcvtydftpda
iissknltagffpmgavilgpelskrletaieaieefphgftasghpvgcaialkaidvv
mneglaenvrrlaprfeerlkhiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvs
eriantctdlglicrplgqsvvlcppfilteaqmdemfdklekaldkvfaeva

    Sequence, based on observed residues (ATOM records): (download) 
    >4e3qD (D:)
nkpqswearaetyslygftdmpslhqrgtvvvthgegpyivdvngrryldansglwnmva
gfdhkglidaakaqyerfpgyhaffgrmsdqtvmlseklvevspfdsgrvfytnsgsean
dtmvkmlwflhaaegkpqkrkiltrwnayhgvtavsasmtgkpynsvfglplpgfvhltc
phywrygeegeteeqfvarlareleetiqregadtiagffaepvmgaggvippakgyfqa
ilpilrkydipvisdevicgfgrtgntwgcvtydftpdaiissknltagffpmgavilgp
elskrletaieaieefphgftasghpvgcaialkaidvvmneglaenvrrlaprfeerlk
hiaerpnigeyrgigfmwaleavkdkasktpfdgnlsvseriantctdlglicrplgqsv
vlcppfilteaqmdemfdklekaldkvfaeva