PDB entry 4dle

View 4dle on RCSB PDB site
Description: Ternary Structure of the large Fragment of Taq DNA Polymerase: 4-Fluoroproline Variant
Class: Transferase/DNA
Keywords: DNA polymerase, non-canonical amino acid, unnatural amino acid, 4-fluoroproline, Transferase-DNA complex
Deposited on 2012-02-06, released 2012-11-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-01-15, with a file datestamp of 2014-01-10.
Experiment type: XRAY
Resolution: 2.44 Å
R-factor: 0.235
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase I, thermostable
    Species: Thermus aquaticus [TaxId:271]
    Gene: polA, pol1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4dlea1, d4dlea2
  • Chain 'B':
    Compound: DNA Primer
  • Chain 'C':
    Compound: DNA Template
  • Heterogens: MG, GOL, DCT, MN, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4dleA (A:)
aleeaxwxxxegafvgfvlsrkexmwadllalaaarggrvhraxexykalrdlkeargll
akdlsvlalreglglxxgddxmllaylldxsnttxegvarryggewteeageraalserl
fanlwgrlegeerllwlyreverxlsavlahmeatgvrldvaylralslevaeeiarlea
evfrlaghxfnlnsrdqlervlfdelglxaigktektgkrstsaavlealreahxiveki
lqyreltklkstyidxlxdlihxrtgrlhtrfnqtatatgrlsssdxnlqnixvrtxlgq
rirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvxre
avdxlmrraaktinfgvlygmsahrlsqelaixyeeaqafieryfqsfxkvrawiektle
egrrrgyvetlfgrrryvxdlearvksvreaaermafnmxvqgtaadlmklamvklfxrl
eemgarmllqvhdelvleaxkeraeavarlakevmegvyxlavxlevevgigedwlsake

    Sequence, based on observed residues (ATOM records): (download) 
    >4dleA (A:)
leeaxwxxxegafvgfvlsrkexmwadllalaaarggrvhraxexykalrdlkearglla
kdlsvlalreglglxxgddxmllaylldxsnttxegvarryggewteeageraalserlf
anlwgrlegeerllwlyreverxlsavlahmeatgvrldvaylralslevaeeiarleae
vfrlaghxfnlnsrdqlervlfdelglxaigktektgkrstsaavlealreahxivekil
qyreltklkstyidxlxdlihxrtgrlhtrfnqtatatgrlsssdxnlqnixvrtxlgqr
irrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvxrea
vdxlmrraaktinfgvlygmsahrlsqelaixyeeaqafieryfqsfxkvrawiektlee
grrrgyvetlfgrrryvxdlearvksvreaaermafnmxvqgtaadlmklamvklfxrle
emgarmllqvhdelvleaxkeraeavarlakevmegvyxlavxlevevgigedwlsake

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.