PDB entry 4df3

View 4df3 on RCSB PDB site
Description: Crystal Structure of Aeropyrum pernix fibrillarin in complex with natively bound S-adenosyl-L-methionine at 1.7A
Class: transferase
Keywords: NADP Rossmann Superfamily, methyltransferase, S-adenosyl-L-methionine (SAM) binding, nucleolus, TRANSFERASE
Deposited on 2012-01-22, released 2012-08-08
The last revision prior to the SCOPe 2.02 freeze date was dated 2013-02-20, with a file datestamp of 2013-02-15.
Experiment type: XRAY
Resolution: 1.73 Å
R-factor: 0.19
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
    Species: Aeropyrum pernix [TaxId:56636]
    Gene: flpA, APE_2196
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9U3 (0-End)
      • engineered mutation (7-8)
  • Chain 'B':
    Compound: Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
    Species: Aeropyrum pernix [TaxId:56636]
    Gene: flpA, APE_2196
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9U3 (0-End)
      • engineered mutation (7-8)
    Domains in SCOPe 2.02: d4df3b_
  • Heterogens: SAM, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4df3B (B:)
    mvevvsvsrhdrwrgvyvveledgslriatknlvpgqrvygerifryngeeyrewnayrs
    klaaallkglielpvkegdrilylgiasgttashmsdiigprgriygvefaprvmrdllt
    vvrdrrnifpilgdarfpekyrhlvegvdglyadvaqpeqaaivvrnarfflrdggymlm
    aikarsidvttepsevykreiktlmdggleikdvvhldpfdrdhamiyavmrr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4df3B (B:)
    mvevvsvsrhdrwrgvyvveledgslriatknlvpgqrvygerifryngeeyrewnayrs
    klaaallkglielpvkegdrilylgiasgttashmsdiigprgriygvefaprvmrdllt
    vvrdrrnifpilgdarfpekyrhlvegvdglyadvaqpeqaaivvrnarfflrdggymlm
    aikarsidvttepsevykreiktlmdggleikdvvhldpfdrdhamiyav