PDB entry 4db3

View 4db3 on RCSB PDB site
Description: 1.95 Angstrom Resolution Crystal Structure of N-acetyl-D-glucosamine kinase from Vibrio vulnificus.
Class: transferase
Keywords: Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, TRANSFERASE
Deposited on 2012-01-13, released 2012-01-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: n-acetyl-d-glucosamine kinase
    Species: Vibrio vulnificus [TaxId:672]
    Gene: nagK, VV1_2570
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8D9M7 (24-326)
      • expression tag (16-23)
    Domains in SCOPe 2.08: d4db3a1, d4db3a2, d4db3a3
  • Heterogens: ZN, CL, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4db3A (A:)
mhhhhhhssgvdlgtenlyfqsnamyygfdvggtkiefgafneklervatervptptddy
pllletiaglvakydqefacegkiglglpgmedaddatvltvnvpaakgkplradleaki
grsvkiendancfalseawdeelqdapsvmglilgtgfgggliyegkvfsgrnnvagelg
hmrlpldawfhlgdnapllgcgcgkkgcldsylsgrgfellyahyygeekkaidiikana
agdekaaehverfmellaicfgniftandphvvalggglsnfeliyeempkrvpkyllsv
akcpkiikakhgdsggvrgaaflnikg

    Sequence, based on observed residues (ATOM records): (download) 
    >4db3A (A:)
nlyfqsnamyygfdvggtkiefgafneklervatervptptddypllletiaglvakydq
efacegkiglglpgmedaddatvltvnvpaakgkplradleakigrsvkiendancfals
eawdeelqdapsvmglilgtgfgggliyegkvfsgrnnvagelghmrlpldawfhlgdna
pllgcgcgkkgcldsylsgrgfellyahyygeekkaidiikanaagdekaaehverfmel
laicfgniftandphvvalggglsnfeliyeempkrvpkyllsvakcpkiikakhgdsgg
vrgaaflnikg