PDB entry 4dam

View 4dam on RCSB PDB site
Description: Crystal structure of small single-stranded DNA-binding protein from Streptomyces coelicolor
Class: DNA binding protein
Keywords: OB-fold, DNA-binding, single-stranded DNA, DNA BINDING PROTEIN
Deposited on 2012-01-13, released 2013-01-16
The last revision prior to the SCOPe 2.02 freeze date was dated 2013-04-10, with a file datestamp of 2013-04-05.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.155
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • expression tag (11)
      • engineered mutation (15)
    Domains in SCOPe 2.02: d4dama_
  • Chain 'B':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
    Domains in SCOPe 2.02: d4damb_
  • Chain 'C':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • expression tag (11)
      • engineered mutation (15)
    Domains in SCOPe 2.02: d4damc_
  • Chain 'D':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
    Domains in SCOPe 2.02: d4damd_
  • Chain 'E':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • expression tag (11)
      • engineered mutation (15)
    Domains in SCOPe 2.02: d4dame_
  • Chain 'F':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
  • Chain 'G':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • expression tag (11)
      • engineered mutation (15)
  • Chain 'H':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
  • Chain 'I':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
  • Chain 'J':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
  • Chain 'K':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • expression tag (11)
      • engineered mutation (15)
  • Chain 'L':
    Compound: Single-stranded DNA-binding protein 1
    Species: Streptomyces coelicolor [TaxId:1902]
    Gene: SCC61A.04c, SCO2683, ssb1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KYI9 (12-End)
      • engineered mutation (15)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4damA (A:)
    mrgshhhhhhgsmneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdg
    htnfftvwanrqlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdla
    rgtaafrr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4damA (A:)
    smneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdghtnfftvwanr
    qlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdlargta
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4damB (B:)
    mrgshhhhhhgsmneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdg
    htnfftvwanrqlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdla
    rgtaafrr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4damB (B:)
    mneimicavgnvattpvfrdlangpsvrfrlavtarywdknawtdghtnfftvwanrqla
    tnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdlarg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4damC (C:)
    mrgshhhhhhgsmneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdg
    htnfftvwanrqlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdla
    rgtaafrr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4damC (C:)
    smneimicavgnvattpvfrdlangpsvrfrlavtarywdawtdghtnfftvwanrqlat
    nasgslavgdpvvvqgrlkvrrtsadidavaighdlargt
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4damD (D:)
    mrgshhhhhhgsmneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdg
    htnfftvwanrqlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdla
    rgtaafrr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4damD (D:)
    mneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdghtnfftvwanrq
    latnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdlar
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4damE (E:)
    mrgshhhhhhgsmneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdg
    htnfftvwanrqlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdla
    rgtaafrr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4damE (E:)
    smneimicavgnvattpvfrdlangpsvrfrlavtarywdreknawtdghtnfftvwanr
    qlatnasgslavgdpvvvqgrlkvrtdvregqsrtsadidavaighdlargt
    

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.