PDB entry 4d0c
View 4d0c on RCSB PDB site
Description: complex of a b21 chicken MHC class I molecule and a 10mer chicken peptide
Class: immune system
Keywords: immune system
Deposited on
2014-04-25, released
2015-05-06
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-05-06, with a file datestamp of
2015-05-01.
Experiment type: XRAY
Resolution: 2.81 Å
R-factor: N/A
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I alpha chain 2
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4d0ca1, d4d0ca2, d4d0ca3 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4d0cb_ - Chain 'C':
Compound: 10mer peptide
Species: GALLUS GALLUS, synthetic [TaxId:9031]
Database cross-references and differences (RAF-indexed):
- Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4d0cA (A:)
mgscgalglglllaavcgaaaelhtlryirtamtdpgpglpwfvdvgyvdgelfmhynst
arravprtewiaantdqqywdretqivqgseqinrenldilrrrynqtggshtvqwmsgc
diledgtirgyhqaaydgrdfvafdkgtmtltaavpeavptkrkweeggyaeglkqylee
tcvewlrryveygkaelgrrerpevrvwgkeadgiltlscrahgfyprpivvswlkdgav
rgqdaqsggivpngdgtyhtwvtidaqpgdgdkyqcrvehaslpqpglyswrsggglndi
feaqkiewhensssvdklaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4d0cA (A:)
elhtlryirtamtdpgpglpwfvdvgyvdgelfmhynstarravprtewiaantdqqywd
retqivqgseqinrenldilrrrynqtggshtvqwmsgcdiledgtirgyhqaaydgrdf
vafdkgtmtltaavpeavptkrkweeggyaeglkqyleetcvewlrryveygkaelgrre
rpevrvwgkeadgiltlscrahgfyprpivvswlkdgavrgqdaqsggivpngdgtyhtw
vtidaqpgdgdkyqcrvehaslpqpglyswrsgggl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4d0cB (B:)
dltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwt
fqrlvhadftpssgstyackvehetlkepqvykwdpef
Sequence, based on observed residues (ATOM records): (download)
>4d0cB (B:)
ltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwtf
qrlvhadftpssgstyackvehetlkepqvykwdpef
- Chain 'C':
No sequence available.