PDB entry 4cko

View 4cko on RCSB PDB site
Description: Crystal structure of the neuronal isoform of PTB
Class: translation
Keywords: translation, RNA binding protein, brptb
Deposited on 2014-01-07, released 2014-01-29
The last revision prior to the SCOPe 2.03 freeze date was dated 2014-01-29, with a file datestamp of 2014-01-24.
Experiment type: XRAY
Resolution: 1.69 Å
R-factor: 0.2306
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckoa1
  • Chain 'B':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckob1, d4ckob2
  • Chain 'C':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckoc1, d4ckoc2
  • Chain 'D':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckod1, d4ckod2
  • Chain 'E':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckoe1, d4ckoe2
  • Chain 'F':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckof1, d4ckof2
  • Chain 'G':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckog1, d4ckog2
  • Chain 'H':
    Compound: polypyrimidine tract-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4ckoh1, d4ckoh2
  • Heterogens: CL, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ckoA (A:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoA (A:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprdqgltkdfgnsplhrfkkpgsknfqnifppsatlhls
nippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenh
hlrvsfsksti

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ckoB (B:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoB (B:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprdqgltkdfgnsplhrfkkpgsknfqnifppsatlhls
nippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenh
hlrvsfsksti

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4ckoC (C:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoC (C:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlpgltkdfgnsplhrfkkpgsknfqnifppsatlhlsnip
psvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenhhlr
vsfsksti

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4ckoD (D:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoD (D:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprgltkdfgnsplhrfkkpgsknfqnifppsatlhlsni
ppsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenhhl
rvsfsksti

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4ckoE (E:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoE (E:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprgltkdfgnsplhrfkkpgsknfqnifppsatlhlsni
ppsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenhhl
rvsfsksti

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4ckoF (F:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoF (F:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprdqgltkdfgnsplhrfkkpgsknfqnifppsatlhls
nippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenh
hlrvsfsksti

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4ckoG (G:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoG (G:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprdqgltkdfgnsplhrfkkpgsknfqnifppsatlhls
nippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenh
hlrvsfsksti

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4ckoH (H:)
gntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhl
ngqkmygkiirvtlskhqtvqlpreglddqgltkdfgnsplhrfkkpgsknfqnifppsa
tlhlsnippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnyn
lgenhhlrvsfsksti

    Sequence, based on observed residues (ATOM records): (download) 
    >4ckoH (H:)
ntvllvsnlneemvtpqslftlfgvygdvqrvkilynkkdsaliqmadgnqsqlamnhln
gqkmygkiirvtlskhqtvqlprdqgltkdfgnsplhrfkkpgsknfqnifppsatlhls
nippsvaeedlrtlfantggtvkafkffqdhkmallqmatveeaiqalidlhnynlgenh
hlrvsfsksti