PDB entry 4bvu

View 4bvu on RCSB PDB site
Description: Structure of Shigella effector OspG in complex with host UbcH5c- Ubiquitin conjugate
Class: transferase/ligase/protein binding
Keywords: transferase-ligase-protein binding complex, kinase
Deposited on 2013-06-28, released 2014-01-29
The last revision prior to the SCOPe 2.04 freeze date was dated 2014-03-19, with a file datestamp of 2014-03-14.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.24658
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein kinase ospg
    Species: Shigella flexneri [TaxId:623]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ubiquitin-conjugating enzyme E2 D3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61077 (Start-146)
      • engineered mutation (84)
    Domains in SCOPe 2.04: d4bvub_
  • Chain 'C':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bvuc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4bvuB (B:)
malkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltihfptdy
pfkppkvafttriyhpninsngsisldilrsqwspaltiskvllsicsllcdpnpddplv
peiariyktdrdkynrisrewtqkyam

    Sequence, based on observed residues (ATOM records): (download) 
    >4bvuB (B:)
alkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltihfptdyp
fkppkvafttriyhpninsngsisldilrsqwspaltiskvllsicsllcdpnpddplvp
eiariyktdrdkynrisrewtqkyam

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4bvuC (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg