PDB entry 4bh0

View 4bh0 on RCSB PDB site
Description: H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Human Receptor Analogue 6'-SLN
Class: viral protein
Keywords: viral protein, n-glycosylation, virus receptor, bird flu
Deposited on 2013-03-29, released 2013-04-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-05-22, with a file datestamp of 2013-05-17.
Experiment type: XRAY
Resolution: 2.36 Å
R-factor: 0.21371
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: INFLUENZA VIRUS [TaxId:375457]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4bh0a_
  • Chain 'B':
    Compound: Hemagglutinin
    Species: INFLUENZA VIRUS [TaxId:375457]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4bh0b_
  • Chain 'C':
    Compound: Hemagglutinin
    Species: INFLUENZA VIRUS [TaxId:375457]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4bh0c_
  • Chain 'D':
    Compound: Hemagglutinin
    Species: INFLUENZA VIRUS [TaxId:375457]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4bh0d_
  • Chain 'E':
    Compound: Hemagglutinin
    Species: INFLUENZA VIRUS [TaxId:375457]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q207Z6 (1-End)
      • expression tag (0)
    Domains in SCOPe 2.07: d4bh0e1, d4bh0e2
  • Chain 'F':
    Compound: Hemagglutinin
    Species: INFLUENZA VIRUS [TaxId:375457]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4bh0f_
  • Heterogens: NAG, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4bh0A (A:)
    pdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
    wllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipk
    sswsdheasagvssacpyqgrssffrnvvwlikkdnayptikrsynntnqedllvlwgih
    hpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
    nfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihplti
    gecpkyvkssrlvlatglrnspqretr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4bh0A (A:)
    dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvagw
    llgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipks
    swsdheasagvssacpyqgrssffrnvvwlikkdnayptikrsynntnqedllvlwgihh
    pndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilkpndain
    fesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpltig
    ecpkyvkssrlvlatglrn
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4bh0B (B:)
    glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
    tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
    kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseea
    

    Sequence, based on observed residues (ATOM records): (download)
    >4bh0B (B:)
    ieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgre
    fnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdn
    akelgngcfefyhrcdnecmesvrng
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4bh0C (C:)
    pdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
    wllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipk
    sswsdheasagvssacpyqgrssffrnvvwlikkdnayptikrsynntnqedllvlwgih
    hpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
    nfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihplti
    gecpkyvkssrlvlatglrnspqretr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4bh0C (C:)
    dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvagw
    llgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipks
    swsdheasagvssacpyqgrssffrnvvwlikkdnayptikrsynntnqedllvlwgihh
    pndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilkpndain
    fesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihpltig
    ecpkyvkssrlvlatglrn
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4bh0D (D:)
    glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
    tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
    kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseea
    

    Sequence, based on observed residues (ATOM records): (download)
    >4bh0D (D:)
    ieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgre
    fnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdn
    akelgngcfefyhrcdnecmesvrngty
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4bh0E (E:)
    pdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
    wllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipk
    sswsdheasagvssacpyqgrssffrnvvwlikkdnayptikrsynntnqedllvlwgih
    hpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
    nfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihplti
    gecpkyvkssrlvlatglrnspqretr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4bh0E (E:)
    pdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
    wllgnpmcdeflnvpewsyivekinpandlcypgnfndyeelkhllsrinhfekiqiipk
    sswsdheasagvssacpyqgrssffrnvvwlikkdnayptikrsynntnqedllvlwgih
    hpndaaeqtrlyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
    nfesngnfiapenaykivkkgdstimkseleygncntkcqtpigainssmpfhnihplti
    gecpkyvkssrlvlatglrn
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4bh0F (F:)
    glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
    tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
    kvrlqlrdnakelgngcfefyhrcdnecmesvrngtydypqyseea
    

    Sequence, based on observed residues (ATOM records): (download)
    >4bh0F (F:)
    ieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmntqfeavgre
    fnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlydkvrlqlrdn
    akelgngcfefyhrcdnecmesvrngty