PDB entry 4auq

View 4auq on RCSB PDB site
Description: Structure of BIRC7-UbcH5b-Ub complex.
Class: ligase/ligase/signalling protein
Keywords: ligase-ligase-signalling protein complex
Deposited on 2012-05-21, released 2012-08-15
The last revision prior to the SCOPe 2.03 freeze date was dated 2012-09-26, with a file datestamp of 2012-09-21.
Experiment type: XRAY
Resolution: 2.18 Å
R-factor: 0.2044
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ubiquitin-conjugating enzyme e2 d2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62837 (Start-146)
      • engineered mutation (21)
      • engineered mutation (76)
      • engineered mutation (84)
    Domains in SCOPe 2.03: d4auqa_
  • Chain 'B':
    Compound: Baculoviral IAP repeat-containing protein 7
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG48 (5-80)
      • expression tag (4)
    Domains in SCOPe 2.03: d4auqc_
  • Chain 'D':
    Compound: ubiquitin-conjugating enzyme e2 d2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62837 (Start-146)
      • engineered mutation (21)
      • engineered mutation (76)
      • engineered mutation (84)
    Domains in SCOPe 2.03: d4auqd_
  • Chain 'E':
    Compound: Baculoviral IAP repeat-containing protein 7
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4auqf_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4auqA (A:)
malkrihkelndlardppaqcragpvgddmfhwqatimgpndspyqggvffltihfptdy
pfkppkvafttriyhpainsngsisldilrsqwspaltiskvllsicsllcdpnpddplv
peiariyktdrekynriarewtqkyam

    Sequence, based on observed residues (ATOM records): (download) 
    >4auqA (A:)
alkrihkelndlardppaqcragpvgddmfhwqatimgpndspyqggvffltihfptdyp
fkppkvafttriyhpainsngsisldilrsqwspaltiskvllsicsllcdpnpddplvp
eiariyktdrekynriarewtqkyam

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4auqC (C:)
gsggsmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrt
lsdyniqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >4auqC (C:)
smqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlrgg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4auqD (D:)
malkrihkelndlardppaqcragpvgddmfhwqatimgpndspyqggvffltihfptdy
pfkppkvafttriyhpainsngsisldilrsqwspaltiskvllsicsllcdpnpddplv
peiariyktdrekynriarewtqkyam

    Sequence, based on observed residues (ATOM records): (download) 
    >4auqD (D:)
alkrihkelndlardppaqcragpvgddmfhwqatimgpndspyqggvffltihfptdyp
fkppkvafttriyhpainsngsisldilrsqwspaltiskvllsicsllcdpnpddplvp
eiariyktdrekynriarewtqkyam

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4auqF (F:)
gsggsmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrt
lsdyniqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >4auqF (F:)
qifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyni
qkestlhlvlrlrgg