PDB entry 4a72

View 4a72 on RCSB PDB site
Description: Crystal structure of the omega transaminase from Chromobacterium violaceum in a mixture of apo and PLP-bound states
Class: transferase
Keywords: transferase, plp-binding enzyme, transaminase fold type I
Deposited on 2011-11-10, released 2012-01-25
The last revision prior to the SCOPe 2.05 freeze date was dated 2012-08-01, with a file datestamp of 2012-07-27.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.1763
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: omega transaminase
    Species: Chromobacterium violaceum [TaxId:536]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4a72a_
  • Chain 'B':
    Compound: omega transaminase
    Species: Chromobacterium violaceum [TaxId:536]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4a72b_
  • Chain 'C':
    Compound: omega transaminase
    Species: Chromobacterium violaceum [TaxId:536]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4a72c_
  • Chain 'D':
    Compound: omega transaminase
    Species: Chromobacterium violaceum [TaxId:536]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4a72d_
  • Heterogens: PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4a72A (A:)
mqkqrttsqwreldaahhlhpftdtaslnqagarvmtrgegvylwdsegnkiidgmaglw
cvnvgygrkdfaeaarrqmeelpfyntffktthpavvelssllaevtpagfdrvfytnsg
sesvdtmirmvrrywdvqgkpekktligrwngyhgstiggaslggmkymheqgdlpipgm
ahieqpwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppat
ywpeiericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigav
fvgkrvaegliaggdfnhgftysghpvcaavahanvaalrdegivqrvkddigpymqkrw
retfsrfehvddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgd
hivsapplvmtraevdemlavaercleefeqtlkargla

    Sequence, based on observed residues (ATOM records): (download) 
    >4a72A (A:)
qwreldaatrgegvylwdsegnkiidgmaglwcvnvgygrkdfaeaarrqmeelpfyntf
fktthpavvelssllaevtpagfdrvfytnsgsesvdtmirmvrrywdvqgkpekktlig
rwngyhgstiggaslggmkymhgdlpipgmahieqpwwykhgkdmtpdefgvvaarwlee
kileigadkvaafvgepiqgaggvivppatywpeiericrkydvllvadevicgfgrtge
wfghqhfgfqpdlftaakglssgylpigavfvgkrvaegliaggdfnhgftysghpvcaa
vahanvaalrdegivqrvkddigpymqkrwretfsrfehvddvrgvgmvqaftlvknkak
relfpdfgeigtlcrdiffrnnlimracgdhivsapplvmtraevdemlavaercleefe
qtlkargla

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4a72B (B:)
mqkqrttsqwreldaahhlhpftdtaslnqagarvmtrgegvylwdsegnkiidgmaglw
cvnvgygrkdfaeaarrqmeelpfyntffktthpavvelssllaevtpagfdrvfytnsg
sesvdtmirmvrrywdvqgkpekktligrwngyhgstiggaslggmkymheqgdlpipgm
ahieqpwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppat
ywpeiericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigav
fvgkrvaegliaggdfnhgftysghpvcaavahanvaalrdegivqrvkddigpymqkrw
retfsrfehvddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgd
hivsapplvmtraevdemlavaercleefeqtlkargla

    Sequence, based on observed residues (ATOM records): (download) 
    >4a72B (B:)
rvmtrgegvylwdsegnkiidgmaglwcvnvgygrkdfaeaarrqmeelpfyntffktth
pavvelssllaevtpagfdrvfytnsgsesvdtmirmvrrywdvqgkpekktligrwngy
hgstiggaslggmkymheqgdlpipgmahieqpwwykhgkdmtpdefgvvaarwleekil
eigadkvaafvgepiqgaggvivppatywpeiericrkydvllvadevicgfgrtgewfg
hqhfgfqpdlftaakglssgylpigavfvgkrvaegliaggdfnhgftysghpvcaavah
anvaalrdegivqrvkddigpymqkrwretfsrfehvddvrgvgmvqaftlvknkakrel
fpdfgeigtlcrdiffrnnlimracgdhivsapplvmtraevdemlavaercleefeqtl
kargla

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4a72C (C:)
mqkqrttsqwreldaahhlhpftdtaslnqagarvmtrgegvylwdsegnkiidgmaglw
cvnvgygrkdfaeaarrqmeelpfyntffktthpavvelssllaevtpagfdrvfytnsg
sesvdtmirmvrrywdvqgkpekktligrwngyhgstiggaslggmkymheqgdlpipgm
ahieqpwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppat
ywpeiericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigav
fvgkrvaegliaggdfnhgftysghpvcaavahanvaalrdegivqrvkddigpymqkrw
retfsrfehvddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgd
hivsapplvmtraevdemlavaercleefeqtlkargla

    Sequence, based on observed residues (ATOM records): (download) 
    >4a72C (C:)
rttsqwreldaahhlhpftdtaslnqagarvmtrgegvylwdsegnkiidgmaglwcvnv
gygrkdfaeaarrqmeelpfyntffktthpavvelssllaevtpagfdrvfytnsgsesv
dtmirmvrrywdvqgkpekktligrwngyhgstiggaslggmkymheqdlpipgmahieq
pwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppatywpei
ericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigavfvgkr
vaegliaggdfnhgftysghpvcaavahanvaalrdegivqrvkddigpymqkrwretfs
rfehvddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgdhivsa
pplvmtraevdemlavaercleefeqtlkargl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4a72D (D:)
mqkqrttsqwreldaahhlhpftdtaslnqagarvmtrgegvylwdsegnkiidgmaglw
cvnvgygrkdfaeaarrqmeelpfyntffktthpavvelssllaevtpagfdrvfytnsg
sesvdtmirmvrrywdvqgkpekktligrwngyhgstiggaslggmkymheqgdlpipgm
ahieqpwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppat
ywpeiericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigav
fvgkrvaegliaggdfnhgftysghpvcaavahanvaalrdegivqrvkddigpymqkrw
retfsrfehvddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgd
hivsapplvmtraevdemlavaercleefeqtlkargla

    Sequence, based on observed residues (ATOM records): (download) 
    >4a72D (D:)
rttsqwreldaahhlhpftdtaslnqagarvmtrgegvylwdsegnkiidgmaglwcvnv
gygrkdfaeaarrqmeelpfyntffktthpavvelssllaevtpagfdrvfytnsgsesv
dtmirmvrrywdvqgkpekktligrwngyhgstiggaslggmkymheqgdlpipgmahie
qpwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppatywpe
iericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigavfvgk
rvaegliaggdfnhgftysghpvcaavahanvaalrdegivqrvkddigpymqkrwretf
srfehvddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgdhivs
applvmtraevdemlavaercleefeqtlkargl