PDB entry 3wxi

View 3wxi on RCSB PDB site
Description: Crystal structure of trypanosoma brucei gambiense glycerol kinase (ligand-free form)
Class: Transferase
Keywords: GLYCEROL KINASE, TRYPANOSOMA, SUGAR KINASE SUPERFAMILY, Transferase, Glycosome
Deposited on 2014-08-01, released 2014-12-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-12-24, with a file datestamp of 2014-12-19.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.206
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycerol kinase
    Species: Trypanosoma brucei gambiense [TaxId:31285]
    Gene: gk
    Database cross-references and differences (RAF-indexed):
    • Uniprot D3KVM3 (6-End)
      • expression tag (4-5)
    Domains in SCOPe 2.08: d3wxia1, d3wxia2, d3wxia3
  • Chain 'B':
    Compound: glycerol kinase
    Species: Trypanosoma brucei gambiense [TaxId:31285]
    Gene: gk
    Database cross-references and differences (RAF-indexed):
    • Uniprot D3KVM3 (6-End)
      • expression tag (4-5)
    Domains in SCOPe 2.08: d3wxib1, d3wxib2, d3wxib3
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3wxiA (A:)
gidpftmkyvgsidqgttstrfiifderqrpvsvhqvphtqhtphpgwlehdpmeifrsa
ckcmsvaiaklrqkdasfrkieaigitnqrettvawdrvtkeplcyapvwndlrtyditk
kvtaelgggdsmfaskitglpvstyfaafkmrwmlenvpavadacrrgtlcfgtidtwlm
yklsggkafvtdvtnasrtflmdlrtrkwspelceklkipmetlpeirsnselfgyvetd
ecgvaaalnertpimgsigdqqsalfgnmcfekgeakntygtgcfllmnvgeearfskhg
llstvgfqvgrdgpcyyalegaiacagatvewmrrnmnlfshiteceklarsvpgtqgiv
fvpafsgllapywdpsargtivgmtlkttrahviraalqaialqlndvvgsmkrdaglnl
sslrvdgglskngllmeiqasllgvdilvpsmhettalgaalcaglaagvwtsleevkav
srrenswktvspsgsamereamiaewrealkrtkwakl

    Sequence, based on observed residues (ATOM records): (download) 
    >3wxiA (A:)
ftmkyvgsidqgttstrfiifderqrpvsvhqvphtqhtphpgwlehdpmeifrsackcm
svaiaklrqkdasfrkieaigitnqrettvawdrvtkeplcyapvwndlrtyditkkvta
elgggdsmfaskitglpvstyfaafkmrwmlenvpavadacrrgtlcfgtidtwlmykls
ggkafvtdvtnasrtflmdlrtrkwspelceklkipmetlpeirsnselfgyvetdecgv
aaalnertpimgsigdqqsalfgnmcfekgeakntygtgcfllmnvgeearfskhgllst
vgfqvgrdgpcyyalegaiacagatvewmrrnmnlfshiteceklarsvpgtqgivfvpa
fsgllapywdpsargtivgmtlkttrahviraalqaialqlndvvgsmkrdaglnlsslr
vdgglskngllmeiqasllgvdilvpsmhettalgaalcaglaagvwtsleevkavsrre
nswktvspsgsamereamiaewrealkrtkwak

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3wxiB (B:)
gidpftmkyvgsidqgttstrfiifderqrpvsvhqvphtqhtphpgwlehdpmeifrsa
ckcmsvaiaklrqkdasfrkieaigitnqrettvawdrvtkeplcyapvwndlrtyditk
kvtaelgggdsmfaskitglpvstyfaafkmrwmlenvpavadacrrgtlcfgtidtwlm
yklsggkafvtdvtnasrtflmdlrtrkwspelceklkipmetlpeirsnselfgyvetd
ecgvaaalnertpimgsigdqqsalfgnmcfekgeakntygtgcfllmnvgeearfskhg
llstvgfqvgrdgpcyyalegaiacagatvewmrrnmnlfshiteceklarsvpgtqgiv
fvpafsgllapywdpsargtivgmtlkttrahviraalqaialqlndvvgsmkrdaglnl
sslrvdgglskngllmeiqasllgvdilvpsmhettalgaalcaglaagvwtsleevkav
srrenswktvspsgsamereamiaewrealkrtkwakl

    Sequence, based on observed residues (ATOM records): (download) 
    >3wxiB (B:)
ftmkyvgsidqgttstrfiifderqrpvsvhqvphtqhtphpgwlehdpmeifrsackcm
svaiaklrqkdasfrkieaigitnqrettvawdrvtkeplcyapvwndlrtyditkkvta
elgggdsmfaskitglpvstyfaafkmrwmlenvpavadacrrgtlcfgtidtwlmykls
ggkafvtdvtnasrtflmdlrtrkwspelceklkipmetlpeirsnselfgyvetdecgv
aaalnertpimgsigdqqsalfgnmcfekgeakntygtgcfllmnvgeearfskhgllst
vgfqvgrdgpcyyalegaiacagatvewmrrnmnlfshiteceklarsvpgtqgivfvpa
fsgllapywdpsargtivgmtlkttrahviraalqaialqlndvvgsmkrdaglnlsslr
vdgglskngllmeiqasllgvdilvpsmhettalgaalcaglaagvwtsleevkavsrre
nswktvspsgsamereamiaewrealkrtkwa