PDB entry 3wkm
View 3wkm on RCSB PDB site
Description: The periplasmic PDZ tandem fragment of the RseP homologue from Aquifex aeolicus in complex with the Fab fragment
Class: hydrolase
Keywords: pdz domain, hydrolase
Deposited on
2013-10-28, released
2013-12-18
The last revision prior to the SCOPe 2.03 freeze date was dated
2013-12-18, with a file datestamp of
2013-12-13.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.227
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Putative zinc metalloprotease aq_1964
Species: Aquifex aeolicus [TaxId:224324]
Gene: aq_1964
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Putative zinc metalloprotease aq_1964
Species: Aquifex aeolicus [TaxId:224324]
Gene: aq_1964
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: mouse igg1-kappa fab (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: mouse igg1-kappa fab (heavy chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: mouse igg1-kappa fab (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3wkml1, d3wkml2 - Chain 'M':
Compound: mouse igg1-kappa fab (light chain)
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3wkmm1, d3wkmm2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3wkmL (L:)
yivltqspvslavslgqratiscrasesvdsygdsfmhwyqqkpgqppklliylasnles
gvparfsgsgsrtdftltidpveaddaatyycqqnnedpwtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>3wkmL (L:)
yivltqspvslavslgqratiscrasesvdsygdsfmhwyqqkpgqppklliylasnles
gvparfsgsgsrtdftltidpveaddaatyycqqnnedpwtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnr
- Chain 'M':
Sequence, based on SEQRES records: (download)
>3wkmM (M:)
yivltqspvslavslgqratiscrasesvdsygdsfmhwyqqkpgqppklliylasnles
gvparfsgsgsrtdftltidpveaddaatyycqqnnedpwtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>3wkmM (M:)
yivltqspvslavslgqratiscrasesvdsygdsfmhwyqqkpgqppklliylasnles
gvparfsgsgsrtdftltidpveaddaatyycqqnnedpwtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfn