PDB entry 3wih

View 3wih on RCSB PDB site
Description: Crystal structure of the third fibronectin domain (Fn3) of human ROBO1 in complex with the Fab fragment of murine monoclonal antibody B2212A.
Class: immune system
Keywords: fibronectin type-III domain, hepatocellular carcinoma antigen, angiogenesis, IMMUNE SYSTEM
Deposited on 2013-09-12, released 2015-01-21
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-03-04, with a file datestamp of 2015-02-27.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: roundabout homolog 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DUTT1, ROBO1, Roundabout homolog 1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3wiha_
  • Chain 'B':
    Compound: roundabout homolog 1
    Species: Homo sapiens [TaxId:9606]
    Gene: DUTT1, ROBO1, Roundabout homolog 1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3wihb_
  • Chain 'H':
    Compound: anti-human ROBO1 antibody B2212A Fab heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3WIH (0-218)
  • Chain 'I':
    Compound: anti-human ROBO1 antibody B2212A Fab heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3WIH (0-218)
  • Chain 'L':
    Compound: anti-human ROBO1 antibody B2212A Fab light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3WIH (0-212)
    Domains in SCOPe 2.06: d3wihl1, d3wihl2
  • Chain 'M':
    Compound: anti-human ROBO1 antibody B2212A Fab light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3WIH (0-212)
    Domains in SCOPe 2.06: d3wihm1, d3wihm2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3wihA (A:)
    appqgvtvskndgngtailvswqpppedtqngmvqeykvwclgnetryhinktvdgstfs
    vvipflvpgirysvevaastgagsgvksepqfiqlda
    

    Sequence, based on observed residues (ATOM records): (download)
    >3wihA (A:)
    appqgvtvskndgngtailvswqpppemvqeykvwclgnetryhinktvdgstfsvvipf
    lvpgirysvevaasgsgvksepqfiqld
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3wihB (B:)
    appqgvtvskndgngtailvswqpppedtqngmvqeykvwclgnetryhinktvdgstfs
    vvipflvpgirysvevaastgagsgvksepqfiqlda
    

    Sequence, based on observed residues (ATOM records): (download)
    >3wihB (B:)
    appqgvtvskndgngtailvswqpppemvqeykvwclgnetryhinktvdgstfsvvipf
    lvpgirysvevaasgsgvksepqfiqld
    

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wihL (L:)
    diqmtqttsslsaslgdrvtiscrasqdisnflnwyqqkpdgtvklliyytsrlhsgvps
    rfsgsgsgtdfsltiskleqediatyfcqqgntlpltfgagtklelkraeaaptvsifpp
    sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrne
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wihM (M:)
    diqmtqttsslsaslgdrvtiscrasqdisnflnwyqqkpdgtvklliyytsrlhsgvps
    rfsgsgsgtdfsltiskleqediatyfcqqgntlpltfgagtklelkraeaaptvsifpp
    sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrne