PDB entry 3wex
View 3wex on RCSB PDB site
Description: Crystal structure of HLA-DP5 in complex with Cry j 1-derived peptide (residues 214-222)
Class: immune system
Keywords: Immunoglobulin Fold, Antigen Presentation, T Cell Receptor, Cell Surface, IMMUNE SYSTEM
Deposited on
2013-07-16, released
2014-07-23
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wexa1, d3wexa2 - Chain 'B':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot I2FL84 (25-208)
- expression tag (0-8)
- expression tag (23-24)
- Chain 'C':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wexc1, d3wexc2 - Chain 'D':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot I2FL84 (25-208)
- expression tag (0-8)
- expression tag (23-24)
- Chain 'E':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wexe1, d3wexe2 - Chain 'F':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot I2FL84 (25-208)
- expression tag (0-8)
- expression tag (23-24)
- Chain 'G':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3wexg1, d3wexg2 - Chain 'H':
Compound: MHC class II antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot I2FL84 (25-208)
- expression tag (0-8)
- expression tag (23-24)
- Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3wexA (A:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
qsgpssgenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3wexA (A:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
q
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3wexC (C:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
qsgpssgenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3wexC (C:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
q
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3wexE (E:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
qsgpssgenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3wexE (E:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
q
- Chain 'F':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3wexG (G:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
qsgpssgenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3wexG (G:)
ikadhvstyamfvqthrptgefmfefdedeqfyvdldkketvwhleefgrafsfeaqggl
aniailnnnlntliqrsnhtqaandppevtvfpkepvelgqpntlichidrffppvlnvt
wlcngepvtegvaeslflprtdysfhkfhyltfvpsaedvydcrvehwgldqpllkhwea
q
- Chain 'H':
No sequence available.