PDB entry 3w9d

View 3w9d on RCSB PDB site
Description: Structure of Human Monoclonal Antibody E317 Fab
Class: immune system
Keywords: IgG fold, HSV gD, IMMUNE SYSTEM
Deposited on 2013-04-03, released 2013-10-02
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-12-17, with a file datestamp of 2014-12-12.
Experiment type: XRAY
Resolution: 2.32 Å
R-factor: 0.194
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: antibody fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9D
  • Chain 'B':
    Compound: antibody fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9D (0-End)
    Domains in SCOPe 2.05: d3w9db1, d3w9db2
  • Chain 'C':
    Compound: antibody fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9D (0-221)
  • Chain 'D':
    Compound: antibody fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9D (0-End)
    Domains in SCOPe 2.05: d3w9dd1, d3w9dd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3w9dB (B:)
eivltqspgtlslspgeratlscrasqsvtssqlawyqqkpgqaprllisgasnratgip
drfsgsgsgtdftltisrlepedfavyycqqygssptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhklyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >3w9dB (B:)
eivltqspgtlslspgeratlscrasqsvtssqlawyqqkpgqaprllisgasnratgip
drfsgsgsgtdftltisrlepedfavyycqqygssptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhklyacevthqglsspvtksfnrg

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3w9dD (D:)
eivltqspgtlslspgeratlscrasqsvtssqlawyqqkpgqaprllisgasnratgip
drfsgsgsgtdftltisrlepedfavyycqqygssptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhklyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >3w9dD (D:)
eivltqspgtlslspgeratlscrasqsvtssqlawyqqkpgqaprllisgasnratgip
drfsgsgsgtdftltisrlepedfavyycqqygssptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhklyacevthqglsspvtksfnrge