PDB entry 3w2y
View 3w2y on RCSB PDB site
Description: Crystal structure of DNA uridine endonuclease Mth212 mutant W205S
Class: hydrolase
Keywords: alpha/beta-sandwich, Hydrolase, DNA binding
Deposited on
2012-12-06, released
2013-12-11
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-12-11, with a file datestamp of
2013-12-06.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.173
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: exodeoxyribonuclease
Species: Methanothermobacter thermautotrophicus [TaxId:187420]
Gene: MTH212, MTH_212
Database cross-references and differences (RAF-indexed):
- Uniprot O26314 (Start-259)
- engineered mutation (207)
Domains in SCOPe 2.06: d3w2ya_ - Chain 'D':
Compound: exodeoxyribonuclease
Species: Methanothermobacter thermautotrophicus [TaxId:187420]
Gene: MTH212, MTH_212
Database cross-references and differences (RAF-indexed):
- Uniprot O26314 (Start-259)
- engineered mutation (207)
Domains in SCOPe 2.06: d3w2yd_ - Heterogens: MG, FMT, PEG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3w2yA (A:)
gshmtvlkiiswnvnglravhrkgflkwfmeekpdilclqeikaapeqlprklrhvegyr
sfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkm
seerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpve
rawidkfiengyvdtfrmfnsdpgqytswsyrtrarernvgwrldyffvneefkgkvkrs
wilsdvmgsdhcpigleiel
Sequence, based on observed residues (ATOM records): (download)
>3w2yA (A:)
tvlkiiswnvnglravhrkgflkwfmeekpdilclqeikaapeqlprklrhvegyrsfft
paerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseer
lkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawi
dkfiengyvdtfrmfnsdpgqytswsyrtrarernvgwrldyffvneefkgkvkrswils
dvmgsdhcpigleiel
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3w2yD (D:)
gshmtvlkiiswnvnglravhrkgflkwfmeekpdilclqeikaapeqlprklrhvegyr
sfftpaerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkm
seerlkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpve
rawidkfiengyvdtfrmfnsdpgqytswsyrtrarernvgwrldyffvneefkgkvkrs
wilsdvmgsdhcpigleiel
Sequence, based on observed residues (ATOM records): (download)
>3w2yD (D:)
tvlkiiswnvnglravhrkgflkwfmeekpdilclqeikaapeqlprklrhvegyrsfft
paerkgysgvamytkvppsslregfgverfdtegriqiadfddfllyniyfpngkmseer
lkyklefydafledvnrerdsgrnviicgdfntahreidlarpkensnvsgflpverawi
dkfiengyvdtfrmfnsdpgqytswsyrtrarernvgwrldyffvneefkgkvkrswils
dvmgsdhcpigleiel