PDB entry 3vph
View 3vph on RCSB PDB site
Description: L-lactate dehydrogenase from Thermus caldophilus GK24 complexed with oxamate, NADH and FBP
Class: oxidoreductase
Keywords: Rossmann fold, Dehydrogenase, OXIDOREDUCTASE
Deposited on
2012-03-01, released
2013-03-06
The last revision prior to the SCOPe 2.03 freeze date was dated
2013-03-06, with a file datestamp of
2013-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.209
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3vpha1, d3vpha2 - Chain 'B':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3vphb1, d3vphb2 - Chain 'C':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3vphc1, d3vphc2 - Chain 'D':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3vphd1, d3vphd2 - Heterogens: OXM, FBP, NAD, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3vphA (A:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3vphB (B:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3vphC (C:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3vphD (D:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf