PDB entry 3vpg
View 3vpg on RCSB PDB site
Description: L-lactate dehydrogenase from Thermus caldophilus GK24
Class: oxidoreductase
Keywords: Rossmann fold, Dehydrogenase, OXIDOREDUCTASE
Deposited on
2012-03-01, released
2013-03-06
The last revision prior to the SCOPe 2.05 freeze date was dated
2014-10-08, with a file datestamp of
2014-10-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.191
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3vpga1, d3vpga2 - Chain 'B':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3vpgb1, d3vpgb2 - Chain 'C':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3vpgc1, d3vpgc2 - Chain 'D':
Compound: l-lactate dehydrogenase
Species: Thermus caldophilus [TaxId:272]
Gene: LDH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3vpgd1, d3vpgd2 - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3vpgA (A:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3vpgB (B:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3vpgC (C:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3vpgD (D:)
mkvgivgsgmvgsatayalallgvarevvlvdldrklaqahaedilhatpfahpvwvrag
sygdlegaravvlaagvaqrpgetrlqlldrnaqvfaqvvprvleaapeavllvatnpvd
vmtqvayrlsalppgrvvgsgtildtarfrallaehlrvapqsvhayvlgehgdsevlvw
ssaqvggvpllefaeargralspedraridegvrraayriiegkgatyygigaglarlvr
ailtdekgvytvsaftpevegvlevslslprilgaggvegtvypslspeerealrrsaei
lkeaafalgf