PDB entry 3vml

View 3vml on RCSB PDB site
Description: Chimera 3-isopropylmalate dehydrogenase between Shewanella oneidensis MR-1 (O) and Shewanella benthica DB21 MT-2 (M) from N-terminal: 20% O middle 70% M residual 10% O
Class: oxidoreductase
Keywords: oxidoreductase, decarboxylating dehydrogenase
Deposited on 2011-12-13, released 2012-12-26
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-12-26, with a file datestamp of 2012-12-21.
Experiment type: XRAY
Resolution: 1.56 Å
R-factor: 0.179
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Shewanella oneidensis, Shewanella benthica, Shewanella oneidensis [TaxId:211586, 43661, 211586]
    Gene: leuB, SO_4235
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8E9N3 (12-78)
      • expression tag (11)
    • Uniprot D2YZL2 (79-338)
    • Uniprot Q8E9N3 (339-End)
    Domains in SCOPe 2.06: d3vmla1, d3vmla2
  • Heterogens: IPM, MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vmlA (A:)
mrgshhhhhhgssyqiavlagdgigpevmaearkvlkavearfglnieyteydvggiaid
nhgcplpeatlkgceaadavlfgsvggpkwehlppndqpergallplrghfelfcnmrpa
klhpglehmsplrsdisekgfdilcvreltggiyfgkpkgrqgegeneeafdtmrysrke
irriakiafesaqgrrkkvtsvdkanvlacsvlwrevveevakdypdvelehiyidnatm
qllrrpnefdvmlcsnlfgdivsdeiamltgsmgllasismnsqgfgmyepaggsapdia
gqgianpvaqilsaalllrhslkledaalaieaavskalnsgyltgellssdqrhkaktt
vqmgdfiadavkagv

    Sequence, based on observed residues (ATOM records): (download) 
    >3vmlA (A:)
ssyqiavlagdgigpevmaearkvlkavearfglnieyteydvggiaidnhgcplpeatl
kgceaadavlfgsvggpkwehlppndqpergallplrghfelfcnmrpaklhpglehmsp
lrsdisekgfdilcvreltggiyfgkpkgrqgegeneeafdtmrysrkeirriakiafes
aqgrrkkvtsvdkanvlacsvlwrevveevakdypdvelehiyidnatmqllrrpnefdv
mlcsnlfgdivsdeiamltgsmgllasismnsqgfgmyepaggsapdiagqgianpvaqi
lsaalllrhslkledaalaieaavskalnsgyltgellssdqrhkakttvqmgdfiadav
kag