PDB entry 3vg0

View 3vg0 on RCSB PDB site
Description: Antibody Fab fragment
Class: immune system
Keywords: Antibody Fab fragment, Immunoglobulin fold, N-linked Glycosylation site, Fab fragment, LBD domain of ObR receptor, IMMUNE SYSTEM
Deposited on 2012-01-10, released 2012-03-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.27 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Monoclonal antibody 9F8 Fab fragment H chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3VG0
    Domains in SCOPe 2.08: d3vg0h_
  • Chain 'L':
    Compound: Monoclonal antibody 9F8 Fab fragment L chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3VG0
    Domains in SCOPe 2.08: d3vg0l1, d3vg0l2
  • Heterogens: ACT, SO4, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3vg0H (H:)
aqevkllesgpglvapseslsitctisgfsltddgvswirqppgkglewlgviwgggsty
fnslfksrlsitrdnsksqvflemdslqtddtamyycakhdghetmdywgqgtsvtvsss
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcts

    Sequence, based on observed residues (ATOM records): (download) 
    >3vg0H (H:)
evkllesgpglvapseslsitctisgfsltddgvswirqppgkglewlgviwgggstyfn
slfksrlsitrdnsksqvflemdslqtddtamyycakhdghetmdywgqgtsvtvssskt
tppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpsstwpsetvtcnvahpasstkvdkkivprdc

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3vg0L (L:)
aeivmtqspkfmstsigdrvnitckatqnvrtavtwyqqkpgqspqaliflasnrhtgvp
arftgsgsgtdftltinnvksedladyfclqhwnypltfgsgtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records): (download) 
    >3vg0L (L:)
eivmtqspkfmstsigdrvnitckatqnvrtavtwyqqkpgqspqaliflasnrhtgvpa
rftgsgsgtdftltinnvksedladyfclqhwnypltfgsgtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne