PDB entry 3vdh

View 3vdh on RCSB PDB site
Description: Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14
Class: hydrolase
Keywords: endo-beta-glucanase/endo-xyloglucanase, glycosyl hydrolase family 5, mixed alpha-beta, tim barrel, hydrolase, structural genomics, psi-biology, protein structure initiative, midwest center for structural genomics, mcsg
Deposited on 2012-01-05, released 2012-01-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-06-22, with a file datestamp of 2016-06-17.
Experiment type: XRAY
Resolution: 1.62 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: B-1,4-endoglucanase
    Species: Prevotella bryantii [TaxId:77095]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vdha_
  • Chain 'B':
    Compound: B-1,4-endoglucanase
    Species: Prevotella bryantii [TaxId:77095]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vdhb_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vdhA (A:)
minqnatymeesaqsavdnfglgfnlgntldangcgtgkpvatyetfwgqpettqdmmtf
lmqngfnavripvtwyehmdaegnvdeawmmrvkaiveyamnaglyaivnvhhdtaagsg
awikadtdvyaatkekfkklwtqianaladydqhllfegynemldgnnswdepqkasgye
alnnyaqdfvdavratggnnatrnlivntyaaakgenvlnnfmlptdavnnhlivqvhsy
dpwnffntkttwdsechntlteifsalskkfttipyiigeygthgesdisvsksspaeki
klaadqaadmvklakdhhsatfywmsifdgsdriqpqwslptvveamqeaynn

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdhA (A:)
tymeesaqsavdnfglgfnlgntldangcgtgkpvatyetfwgqpettqdmmtflmqngf
navripvtwyehmdaegnvdeawmmrvkaiveyamnaglyaivnvhhdtaagsgawikad
tdvyaatkekfkklwtqianaladydqhllfegynemldgnnswdepqkasgyealnnya
qdfvdavratggnnatrnlivntyaaakgenvlnnfmlptdavnnhlivqvhsydpwnff
ntkttwdsechntlteifsalskkfttipyiigeygthgesdisvsksspaekiklaadq
aadmvklakdhhsatfywmsifdgsdriqpqwslptvveamqeayn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3vdhB (B:)
minqnatymeesaqsavdnfglgfnlgntldangcgtgkpvatyetfwgqpettqdmmtf
lmqngfnavripvtwyehmdaegnvdeawmmrvkaiveyamnaglyaivnvhhdtaagsg
awikadtdvyaatkekfkklwtqianaladydqhllfegynemldgnnswdepqkasgye
alnnyaqdfvdavratggnnatrnlivntyaaakgenvlnnfmlptdavnnhlivqvhsy
dpwnffntkttwdsechntlteifsalskkfttipyiigeygthgesdisvsksspaeki
klaadqaadmvklakdhhsatfywmsifdgsdriqpqwslptvveamqeaynn

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdhB (B:)
atymeesaqsavdnfglgfnlgntldangcgtgkpvatyetfwgqpettqdmmtflmqng
fnavripvtwyehmdaegnvdeawmmrvkaiveyamnaglyaivnvhhdtaagsgawika
dtdvyaatkekfkklwtqianaladydqhllfegynemldgnnswdepqkasgyealnny
aqdfvdavratggnnatrnlivntyaaakgenvlnnfmlptdavnnhlivqvhsydpwnf
fntkttwdsechntlteifsalskkfttipyiigeygthgesdisvsksspaekiklaad
qaadmvklakdhhsatfywmsifdgsdriqpqwslptvveamqeayn