PDB entry 3uxk

View 3uxk on RCSB PDB site
Description: P. putida mandelate racemase co-crystallized with the intermediate analogue benzohydroxamate
Class: isomerase
Keywords: Enolase superfamily enzyme, ISOMERASE
Deposited on 2011-12-05, released 2012-02-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-02-29, with a file datestamp of 2012-02-24.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.163
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: mandelate racemase
    Species: Pseudomonas putida [TaxId:303]
    Gene: mdlA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3uxka1, d3uxka2
  • Chain 'B':
    Compound: mandelate racemase
    Species: Pseudomonas putida [TaxId:303]
    Gene: mdlA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3uxkb1, d3uxkb2
  • Chain 'C':
    Compound: mandelate racemase
    Species: Pseudomonas putida [TaxId:303]
    Gene: mdlA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3uxkc1, d3uxkc2
  • Chain 'D':
    Compound: mandelate racemase
    Species: Pseudomonas putida [TaxId:303]
    Gene: mdlA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3uxkd1, d3uxkd2
  • Heterogens: MG, BHO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3uxkA (A:)
    maswshpqfekgalevlfqgpgyhmsevlitglrtravnvplaypvhtavgtvgtaplvl
    idlatsagvvghsylfaytpvalkslkqllddmaamivneplapvsleamlakrfclagy
    tglirmaaagidmaawdalgkvhetplvkllganarpvqaydshsldgvklateravtaa
    elgfravktkigypaldqdlavvrsirqavgddfgimvdynqsldvpaaikrsqalqqeg
    vtwieeptlqhdyeghqriqsklnvpvqmgenwlgpeemfkalsigacrlampdamkigg
    vtgwirasalaqqfgipmsshlfqeisahllaatptahwlerldlagsvieptltfeggn
    avipdlpgvgiiwrekeigkylv
    

    Sequence, based on observed residues (ATOM records): (download)
    >3uxkA (A:)
    evlitglrtravnvplaypvhtavgtvgtaplvlidlatsagvvghsylfaytpvalksl
    kqllddmaamivneplapvsleamlakrfclagytglirmaaagidmaawdalgkvhetp
    lvkllganarpvqaydshsldgvklateravtaaelgfravktkigypaldqdlavvrsi
    rqavgddfgimvdynqsldvpaaikrsqalqqegvtwieeptlqhdyeghqriqsklnvp
    vqmgenwlgpeemfkalsigacrlampdamkiggvtgwirasalaqqfgipmsshlfqei
    sahllaatptahwlerldlagsvieptltfeggnavipdlpgvgiiwrekeigkylv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3uxkB (B:)
    maswshpqfekgalevlfqgpgyhmsevlitglrtravnvplaypvhtavgtvgtaplvl
    idlatsagvvghsylfaytpvalkslkqllddmaamivneplapvsleamlakrfclagy
    tglirmaaagidmaawdalgkvhetplvkllganarpvqaydshsldgvklateravtaa
    elgfravktkigypaldqdlavvrsirqavgddfgimvdynqsldvpaaikrsqalqqeg
    vtwieeptlqhdyeghqriqsklnvpvqmgenwlgpeemfkalsigacrlampdamkigg
    vtgwirasalaqqfgipmsshlfqeisahllaatptahwlerldlagsvieptltfeggn
    avipdlpgvgiiwrekeigkylv
    

    Sequence, based on observed residues (ATOM records): (download)
    >3uxkB (B:)
    evlitglrtravnvplaypvhtavgtvgtaplvlidlatsagvvghsylfaytpvalksl
    kqllddmaamivneplapvsleamlakrfclagytglirmaaagidmaawdalgkvhetp
    lvkllganarpvqaydshsldgvklateravtaaelgfravktkigypaldqdlavvrsi
    rqavgddfgimvdynqsldvpaaikrsqalqqegvtwieeptlqhdyeghqriqsklnvp
    vqmgenwlgpeemfkalsigacrlampdamkiggvtgwirasalaqqfgipmsshlfqei
    sahllaatptahwlerldlagsvieptltfeggnavipdlpgvgiiwrekeigkylv
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3uxkC (C:)
    maswshpqfekgalevlfqgpgyhmsevlitglrtravnvplaypvhtavgtvgtaplvl
    idlatsagvvghsylfaytpvalkslkqllddmaamivneplapvsleamlakrfclagy
    tglirmaaagidmaawdalgkvhetplvkllganarpvqaydshsldgvklateravtaa
    elgfravktkigypaldqdlavvrsirqavgddfgimvdynqsldvpaaikrsqalqqeg
    vtwieeptlqhdyeghqriqsklnvpvqmgenwlgpeemfkalsigacrlampdamkigg
    vtgwirasalaqqfgipmsshlfqeisahllaatptahwlerldlagsvieptltfeggn
    avipdlpgvgiiwrekeigkylv
    

    Sequence, based on observed residues (ATOM records): (download)
    >3uxkC (C:)
    evlitglrtravnvplaypvhtavgtvgtaplvlidlatsagvvghsylfaytpvalksl
    kqllddmaamivneplapvsleamlakrfclagytglirmaaagidmaawdalgkvhetp
    lvkllganarpvqaydshsldgvklateravtaaelgfravktkigypaldqdlavvrsi
    rqavgddfgimvdynqsldvpaaikrsqalqqegvtwieeptlqhdyeghqriqsklnvp
    vqmgenwlgpeemfkalsigacrlampdamkiggvtgwirasalaqqfgipmsshlfqei
    sahllaatptahwlerldlagsvieptltfeggnavipdlpgvgiiwrekeigkylv
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3uxkD (D:)
    maswshpqfekgalevlfqgpgyhmsevlitglrtravnvplaypvhtavgtvgtaplvl
    idlatsagvvghsylfaytpvalkslkqllddmaamivneplapvsleamlakrfclagy
    tglirmaaagidmaawdalgkvhetplvkllganarpvqaydshsldgvklateravtaa
    elgfravktkigypaldqdlavvrsirqavgddfgimvdynqsldvpaaikrsqalqqeg
    vtwieeptlqhdyeghqriqsklnvpvqmgenwlgpeemfkalsigacrlampdamkigg
    vtgwirasalaqqfgipmsshlfqeisahllaatptahwlerldlagsvieptltfeggn
    avipdlpgvgiiwrekeigkylv
    

    Sequence, based on observed residues (ATOM records): (download)
    >3uxkD (D:)
    evlitglrtravnvplaypvhtavgtvgtaplvlidlatsagvvghsylfaytpvalksl
    kqllddmaamivneplapvsleamlakrfclagytglirmaaagidmaawdalgkvhetp
    lvkllganarpvqaydshsldgvklateravtaaelgfravktkigypaldqdlavvrsi
    rqavgddfgimvdynqsldvpaaikrsqalqqegvtwieeptlqhdyeghqriqsklnvp
    vqmgenwlgpeemfkalsigacrlampdamkiggvtgwirasalaqqfgipmsshlfqei
    sahllaatptahwlerldlagsvieptltfeggnavipdlpgvgiiwrekeigkylv