PDB entry 3udu

View 3udu on RCSB PDB site
Description: Crystal structure of putative 3-isopropylmalate dehydrogenase from Campylobacter jejuni
Class: oxidoreductase
Keywords: Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, putative isopropylmalate dehydrogenase, OXIDOREDUCTASE
Deposited on 2011-10-28, released 2011-11-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-29, with a file datestamp of 2020-01-24.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3udua_
  • Chain 'B':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3udub_
  • Chain 'C':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3uduc_
  • Chain 'D':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3udud_
  • Chain 'E':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3udue_
  • Chain 'F':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3uduf_
  • Chain 'G':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3udug_
  • Chain 'H':
    Compound: 3-isopropylmalate dehydrogenase
    Species: Campylobacter jejuni [TaxId:197]
    Gene: leuB, Cj1718c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9PLW0
      • engineered mutation (41)
    Domains in SCOPe 2.08: d3uduh_
  • Heterogens: EDO, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3uduA (A:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduA (A:)
ktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetl
klceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslthasp
lkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirk
kkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsn
lfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaal
mlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3uduB (B:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduB (B:)
tykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetlk
lceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslthaspl
kneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirkk
kvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsnl
fgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaalm
lkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3uduC (C:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduC (C:)
tykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetlk
lceqsdailfgsvggpkwidqrperasllplrkhfnlfanlrpckiyeslthasplknei
iqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirkkkvhl
idkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsnlfgdi
lsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaalmlkys
fkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3uduD (D:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduD (D:)
ktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetl
klceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslthasp
lkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirk
kkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsn
lfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaal
mlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3uduE (E:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduE (E:)
tykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetlk
lceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslthaspl
kneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirkk
kvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsnl
fgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaalm
lkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3uduF (F:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduF (F:)
ktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetl
klceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslthasp
lkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirk
kkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsn
lfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaal
mlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3uduG (G:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduG (G:)
ktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetl
klceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslthasp
lkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirk
kkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsn
lfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaal
mlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3uduH (H:)
snamktykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvals
detlklceqsdailfgsvggpkwdnlpidqrperasllplrkhfnlfanlrpckiyeslt
hasplkneiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesa
rirkkkvhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvm
lcsnlfgdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqil
saalmlkysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn
g

    Sequence, based on observed residues (ATOM records): (download) 
    >3uduH (H:)
tykvavlagdgigplvmkealkiltfiaqkynfsfelneakiggasidaygvalsdetlk
lceqsdailfgsvggpkwdlpidqrperasllplrkhfnlfanlrpckiyeslthasplk
neiiqkgvdilcvreltggiyfgkqdlgkesaydteiytkkeieriariafesarirkkk
vhlidkanvlassilwrevvanvakdyqdinleymyvdnaamqivknpsifdvmlcsnlf
gdilsdelaaingslgllssaslndkgfglyepaggsapdiahlnianpiaqilsaalml
kysfkeeqaaqdienaislalaqgkmtkdlnaksylntdemgdcileilkendn