PDB entry 3u2s
View 3u2s on RCSB PDB site
Description: Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109
Class: immune system
Keywords: greek key, immunoglobulin, immune recognition, IMMUNE SYSTEM
Deposited on
2011-10-04, released
2011-11-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: PG9 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3u2sa_ - Chain 'B':
Compound: PG9 light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3u2sb1, d3u2sb2 - Chain 'C':
Compound: envelope glycoprotein gp120
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: ENV
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: envelope glycoprotein gp120
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: ENV
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: PG9 heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3u2sh_ - Chain 'L':
Compound: PG9 light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3u2sl1, d3u2sl2 - Heterogens: SO4, BU3, NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3u2sA (A:)
erlvesgggvvqpgsslrlscaasgfdfsrqgmhwvrqapgqglewvafikydgsekyha
dsvwgrlsisrdnskdtlylqmnslrvedtatyfcvreaggpdyrngynyydfydgyyny
hymdvwgkgttvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsg
altsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
kglevlfq
Sequence, based on observed residues (ATOM records): (download)
>3u2sA (A:)
erlvesgggvvqpgsslrlscaasgfdfsrqgmhwvrqapgqglewvafikydgsekyha
dsvwgrlsisrdnskdtlylqmnslrvedtatyfcvreaggpdyrngynyydfydgyyny
hymdvwgkgttvtvssastkgpsvfplapaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3u2sB (B:)
qsaltqpasvsgspgqsitiscqgtsndvggyesvswyqqhpgkapkvviydvskrpsgv
snrfsgsksgntasltisglqaedegdyycksltstrrrvfgtgtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshksyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3u2sB (B:)
saltqpasvsgspgqsitiscqgtsndvggyesvswyqqhpgkapkvviydvskrpsgvs
nrfsgsksgntasltisglqaedegdyycksltstrrrvfgtgtkltvlgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshksyscqvthegstvektvap
- Chain 'C':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
Sequence, based on SEQRES records: (download)
>3u2sH (H:)
erlvesgggvvqpgsslrlscaasgfdfsrqgmhwvrqapgqglewvafikydgsekyha
dsvwgrlsisrdnskdtlylqmnslrvedtatyfcvreaggpdyrngynyydfydgyyny
hymdvwgkgttvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsg
altsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
kglevlfq
Sequence, based on observed residues (ATOM records): (download)
>3u2sH (H:)
erlvesgggvvqpgsslrlscaasgfdfsrqgmhwvrqapgqglewvafikydgsekyha
dsvwgrlsisrdnskdtlylqmnslrvedtatyfcvreaggpdyrngynyydfydgyyny
hymdvwgkgttvtvssastkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgv
htfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3u2sL (L:)
qsaltqpasvsgspgqsitiscqgtsndvggyesvswyqqhpgkapkvviydvskrpsgv
snrfsgsksgntasltisglqaedegdyycksltstrrrvfgtgtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshksyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3u2sL (L:)
saltqpasvsgspgqsitiscqgtsndvggyesvswyqqhpgkapkvviydvskrpsgvs
nrfsgsksgntasltisglqaedegdyycksltstrrrvfgtgtkltvlgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshksyscqvthegstvektvap