PDB entry 3tv3
View 3tv3 on RCSB PDB site
Description: Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with Man9
Class: immune system
Keywords: Fab, HIV-1 neutralizing antibody, gp120, IMMUNE SYSTEM
Deposited on
2011-09-19, released
2011-10-19
The last revision prior to the SCOPe 2.08 freeze date was dated
2021-04-28, with a file datestamp of
2021-04-23.
Experiment type: XRAY
Resolution: 1.29 Å
R-factor: N/A
AEROSPACI score: 0.67
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: PGT128 heavy chain, Ig gamma-1 chain C region
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 3TV3 (0-134)
- Uniprot P01857 (135-End)
Domains in SCOPe 2.08: d3tv3h_ - Chain 'L':
Compound: PGT128 light chain, Ig lambda-2 chain C regions
Species: Homo sapiens [TaxId:9606]
Gene: IGLC2
Database cross-references and differences (RAF-indexed):
- PDB 3TV3 (Start-103)
- Uniprot P0CG05 (105-End)
Domains in SCOPe 2.08: d3tv3l1, d3tv3l2 - Heterogens: GOL, AML, EPE, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>3tv3H (H:)
epqlqesgptlveasetlsltcavsgdstaacnsfwgwvrqppgkglewvgslshcasyw
nrgwtyhnpslksrltlaldtpknlvflklnsvtaadtatyycarfggevlrytdwpkpa
wvdlwgrgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsga
ltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscd
Sequence, based on observed residues (ATOM records): (download)
>3tv3H (H:)
epqlqesgptlveasetlsltcavsgdstaacnsfwgwvrqppgkglewvgslshcasyw
nrgwtyhnpslksrltlaldtpknlvflklnsvtaadtatyycarfggevlrytdwpkpa
wvdlwgrgtlvtvssastkgpsvfplapssksggtaalgclvkdyfpepvtvswnsgalt
sgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3tv3L (L:)
qsaltqppsasgspgqsitisctgtsnnfvswyqqhagkapklviydvnkrpsgvpdrfs
gsksgntasltvsglqtddeavyycgslvgnwdvifgggtkltvlgqpkaapsvtlfpps
seelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylslt
peqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3tv3L (L:)
altqppsasgspgqsitisctgtsnnfvswyqqhagkapklviydvnkrpsgvpdrfsgs
ksgntasltvsglqtddeavyycgslvgnwdvifgggtkltvlgqpkaapsvtlfppsse
elqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylsltpe
qwkshrsyscqvthegstvektvap