PDB entry 3tl6

View 3tl6 on RCSB PDB site
Description: Crystal structure of purine nucleoside phosphorylase from Entamoeba histolytica
Class: transferase
Keywords: Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, anaerobic parasitic protozoan, digestive tract cyst, maltose binding protein, MBP, fusion, PNPase, purine metabolism, nucleotide salvage pathway, TRANSFERASE
Deposited on 2011-08-29, released 2011-09-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-09-21, with a file datestamp of 2011-09-16.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: 0.215
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: purine nucleoside phosphorylase
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_130960
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3tl6a_
  • Chain 'B':
    Compound: purine nucleoside phosphorylase
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_130960
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3tl6b_
  • Chain 'C':
    Compound: purine nucleoside phosphorylase
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_130960
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3tl6c_
  • Chain 'D':
    Compound: purine nucleoside phosphorylase
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_130960
    Database cross-references and differences (RAF-indexed):
    • Uniprot C4LXG4 (4-241)
      • expression tag (3)
    Domains in SCOPe 2.08: d3tl6d1, d3tl6d2
  • Chain 'E':
    Compound: purine nucleoside phosphorylase
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_130960
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3tl6e_
  • Chain 'F':
    Compound: purine nucleoside phosphorylase
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_130960
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3tl6f_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3tl6A (A:)
    gpgsmaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgy
    ykgvklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacy
    dsnferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkk
    mgvlavemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalsl
    ak
    

    Sequence, based on observed residues (ATOM records): (download)
    >3tl6A (A:)
    maehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgyykgv
    klsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacydsnf
    erqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkkmgvl
    avemeaaalymiaararkqalcmltisdlcygsgektkftqmmevalslak
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3tl6B (B:)
    gpgsmaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgy
    ykgvklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacy
    dsnferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkk
    mgvlavemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalsl
    ak
    

    Sequence, based on observed residues (ATOM records): (download)
    >3tl6B (B:)
    ehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgyykgvkl
    svqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacydsnfer
    qydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddhsgawkkmgvlavem
    eaaalymiaararkqalcmltisdlcykftqmmevalslak
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3tl6C (C:)
    gpgsmaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgy
    ykgvklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacy
    dsnferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkk
    mgvlavemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalsl
    ak
    

    Sequence, based on observed residues (ATOM records): (download)
    >3tl6C (C:)
    maehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgyykgv
    klsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacydsnf
    erqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddhsgawkkmgvlav
    emeaaalymiaararkqalcmltisdlcyftqmmevalslak
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3tl6D (D:)
    gpgsmaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgy
    ykgvklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacy
    dsnferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkk
    mgvlavemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalsl
    ak
    

    Sequence, based on observed residues (ATOM records): (download)
    >3tl6D (D:)
    smaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgyykg
    vklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacydsn
    ferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddhsgawkkmgvla
    vemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalslak
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3tl6E (E:)
    gpgsmaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgy
    ykgvklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacy
    dsnferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkk
    mgvlavemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalsl
    ak
    

    Sequence, based on observed residues (ATOM records): (download)
    >3tl6E (E:)
    maehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgyykgv
    klsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacydsnf
    erqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkkmgvl
    avemeaaalymiaararkqalcmltisdlcyftqmmevalsla
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3tl6F (F:)
    gpgsmaehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgy
    ykgvklsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacy
    dsnferqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkk
    mgvlavemeaaalymiaararkqalcmltisdlcygsgekmtaeerrtkftqmmevalsl
    ak
    

    Sequence, based on observed residues (ATOM records): (download)
    >3tl6F (F:)
    maehcptphngakygeiaetvlmagdplrvklladtyltdvvqynsvrgavgytgyykgv
    klsvqahgmgmpsigiyayelfnfygvkriirigsagafdeslklgdivigmgacydsnf
    erqydipgkysciadfqlcreavdaaeklgyrykvgniysanyfyddgdhsgawkkmgvl
    avemeaaalymiaararkqalcmltisdlcftqmmevalsla