PDB entry 3t6d

View 3t6d on RCSB PDB site
Description: Crystal Structure of the Reaction Centre from Blastochloris viridis strain DSM 133 (ATCC 19567) substrain-08
Class: electron transport
Keywords: Pigment-protein complex, Electron transport, Photosynthesis, Photosynthetic reaction center, Photosynthetic membranes, Evolution, Genetic drift
Deposited on 2011-07-28, released 2011-11-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-21, with a file datestamp of 2020-10-16.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: Photosynthetic reaction center cytochrome c subunit
    Species: Blastochloris viridis [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3t6dc_
  • Chain 'H':
    Compound: Photosynthetic reaction center H-subunit
    Species: Blastochloris viridis [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3t6dh1, d3t6dh2
  • Chain 'L':
    Compound: Photosynthetic reaction center L-subunit
    Species: Blastochloris viridis [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3t6dl_
  • Chain 'M':
    Compound: Photosynthetic reaction center M-subunit
    Species: Blastochloris viridis [TaxId:1079]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3t6dm_
  • Heterogens: HEC, LDA, DGA, SO4, HTO, GOL, BCB, BPB, UQ9, FE2, MQ9, NS5, HTH, HOH

PDB Chain Sequences:

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3t6dC (C:)
mkqlivnsvatvalaslvagcfepppatttqtgfrglsmgevlhpatvkakkerdaqypp
alpavkaegppvsqvyknvkvlgnlteaeflrtmtamtewvspeegctychdennlasea
kypyvvarrmlemtraintnwtqhvaqtgvtcytchrgtplppyvryleptlplnnretp
thvervetrsgyvvrlakytaysalnydpftmflandkrqvrvvpqtalplvgvsrgker
rplsdayatfalmmsisdslgtnctfchnaqsfetwgkkstpqraiawwgirmvrdmnmn
ylaplntvlpasrlgrqgeapqadcrtchqgvtkplfgasrlqdypelgpikaaak

    Sequence, based on observed residues (ATOM records): (download) 
    >3t6dC (C:)
cfepppatttqtgfrglsmgevlhpatvkakkerdaqyppalpavkaegppvsqvyknvk
vlgnlteaeflrtmtamtewvspeegctychdennlaseakypyvvarrmlemtraintn
wtqhvaqtgvtcytchrgtplppyvryleptlplnnretpthvervetrsgyvvrlakyt
aysalnydpftmflandkrqvrvvpqtalplvgvsrgkerrplsdayatfalmmsisdsl
gtnctfchnaqsfetwgkkstpqraiawwgirmvrdmnmnylaplntvlpasrlgrqgea
pqadcrtchqgvtkplfgasrlqdypelgpikaa

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3t6dH (H:)
myhgalaqhldiaqlvwyaqwlviwtvvllylrredrregyplveplglvklapedgqvy
elpypktfvlphggtvtvprrrpetrelklaqtdgfegaplqptgnplvdavgpasyaer
aevvdatvdgkakivplrvatdfsiaegdvdprglpvvaadgveagtvtdlwvdrsehyf
rylelsvagsartaliplgfcdvkkdkivvtsilsdqfanvprlqsrdqitlreedkvsa
yyaggllyatperaeall

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3t6dL (L:)
allsferkyrvrggtliggdlfdfwvgpyfvgffgvsaiffiflgvsligyaasqgptwd
pfaisinppdlkyglgaaplleggfwqaitvcalgafiswmlreveisrklgigwhvpla
fcvpifmfcvlqvfrplllgswghafpygilshldwvnnfgyqylnwhynpghmssvsfl
fvnamalglhgglilsvanpgdgdkvktaehenqyfrdvvgysigalsihrlglflasni
fltgafgtiasgpfwtrgwpewwgwwldipfws

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3t6dM (M:)
adyqtiytqiqargphitvsgewgdndrigkpfysywlgkigdaqigpiylgasgiaafa
fgatailiigfnmlaevhfdplqffrqffwlglyppkaqygmgipplhdggwwlmaglfm
tlslgswwirvysraralglgthiawnfaaaiffvlcigcihpalvgswsegvpfgiwph
idwltafsirygnfyycpwhgfsigfaygcgllfaahgatilavarfggdreieqitdrg
taveraalfwrwtigfnatiesvhrwgwffslmvmvsasvgilltgtfvdnwylwcvkhg
aapdypaylpatpdpaslpgapk