PDB entry 3sz8

View 3sz8 on RCSB PDB site
Description: Crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from Burkholderia pseudomallei
Class: transferase
Keywords: SSGCID, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2011-07-18, released 2011-08-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-10-09, with a file datestamp of 2013-10-04.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.185
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase 2
    Species: Burkholderia pseudomallei [TaxId:320372]
    Gene: kdsA, kdsA2, BURPS1710b_3264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3JP68 (4-End)
      • expression tag (3)
    Domains in SCOPe 2.08: d3sz8a1, d3sz8a2
  • Chain 'B':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase 2
    Species: Burkholderia pseudomallei [TaxId:320372]
    Gene: kdsA, kdsA2, BURPS1710b_3264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3JP68 (4-End)
      • expression tag (3)
    Domains in SCOPe 2.08: d3sz8b1, d3sz8b2
  • Chain 'C':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase 2
    Species: Burkholderia pseudomallei [TaxId:320372]
    Gene: kdsA, kdsA2, BURPS1710b_3264
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3sz8c_
  • Chain 'D':
    Compound: 2-dehydro-3-deoxyphosphooctonate aldolase 2
    Species: Burkholderia pseudomallei [TaxId:320372]
    Gene: kdsA, kdsA2, BURPS1710b_3264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q3JP68 (4-End)
      • expression tag (3)
    Domains in SCOPe 2.08: d3sz8d1, d3sz8d2
  • Heterogens: ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3sz8A (A:)
gpgsmnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasf
dkanrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpafl
arqtdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlv
vdmlgfrqmaettggcpvifdvthslqcrdplgdasggrrrqvldlaragiavgiaglfl
eahpdpdrarcdgpsalplhqlegllsqmkaiddlvkrmpaleir

    Sequence, based on observed residues (ATOM records): (download) 
    >3sz8A (A:)
smnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasfdka
nrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpaflarq
tdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlvvdm
lgfrqmaettggcpvifdvthslqvldlaragiavgiaglfleahpdpdrarcdgpsalp
lhqlegllsqmkaiddlvkrmpal

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3sz8B (B:)
gpgsmnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasf
dkanrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpafl
arqtdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlv
vdmlgfrqmaettggcpvifdvthslqcrdplgdasggrrrqvldlaragiavgiaglfl
eahpdpdrarcdgpsalplhqlegllsqmkaiddlvkrmpaleir

    Sequence, based on observed residues (ATOM records): (download) 
    >3sz8B (B:)
smnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasfdka
nrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpaflarq
tdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlvvdm
lgfrqmaettggcpvifdvthslrqvldlaragiavgiaglfleahpdpdrapsalplhq
legllsqmkaiddlvkrmpale

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3sz8C (C:)
gpgsmnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasf
dkanrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpafl
arqtdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlv
vdmlgfrqmaettggcpvifdvthslqcrdplgdasggrrrqvldlaragiavgiaglfl
eahpdpdrarcdgpsalplhqlegllsqmkaiddlvkrmpaleir

    Sequence, based on observed residues (ATOM records): (download) 
    >3sz8C (C:)
mnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasfdkan
rssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpaflarqt
dlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlvvdml
gfrqmaettggcpvifdvthslqvldlaragiavgiaglfleahpdpdrarcdgpsalpl
hqlegllsqmkaiddlvkrmpale

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3sz8D (D:)
gpgsmnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasf
dkanrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpafl
arqtdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlv
vdmlgfrqmaettggcpvifdvthslqcrdplgdasggrrrqvldlaragiavgiaglfl
eahpdpdrarcdgpsalplhqlegllsqmkaiddlvkrmpaleir

    Sequence, based on observed residues (ATOM records): (download) 
    >3sz8D (D:)
smnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasfdka
nrssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpaflarq
tdlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlvvdm
lgfrqmaettggcpvifdvthslqvldlaragiavgiaglfleahpdpdrarpsalplhq
legllsqmkaiddlvkrmpale