PDB entry 3s8f

View 3s8f on RCSB PDB site
Description: 1.8 A structure of ba3 cytochrome c oxidase from Thermus thermophilus in lipid environment
Class: oxidoreductase
Keywords: Complex IV, Respiratory chain, Lipid cubic phase, monoolein, peroxide, Electron transport, proton pump, oxidoreductase, Membrane
Deposited on 2011-05-27, released 2011-08-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytochrome c oxidase subunit 1
    Species: Thermus thermophilus [TaxId:300852]
    Gene: cbaA, TTHA1135
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3s8fa_
  • Chain 'B':
    Compound: Cytochrome c oxidase subunit 2
    Species: Thermus thermophilus [TaxId:300852]
    Gene: cbaB, cbac, ctaC, TTHA1134
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3s8fb1, d3s8fb2
  • Chain 'C':
    Compound: Cytochrome c oxidase polypeptide 2A
    Species: Thermus thermophilus [TaxId:300852]
    Gene: cbaD, TTHA1133
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3s8fc_
  • Heterogens: CU, HEM, HAS, PER, OLC, CUA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3s8fA (A:)
mhhhhhhhavraseisrvyeaypekkatlyflvlgflalivgslfgpfqalnygnvdayp
llkrllpfvqsyyqgltlhgvlnaivftqlfaqaimvylparelnmrpnmglmwlswwma
figlvvaalpllaneatvlytfypplkghwafylgasvfvlstwvsiyivldlwrrwkaa
npgkvtplvtymavvfwlmwflaslglvleavlfllpwsfglvegvdplvartlfwwtgh
pivyfwllpayaiiytilpkqaggklvsdpmarlafllflllstpvgfhhqfadpgidpt
wkmihsvltlfvavpslmtaftvaaslefagrlrggrglfgwiralpwdnpafvapvlgl
lgfipggaggivnasftldyvvhntawvpghfhlqvaslvtltamgslywllpnltgkpi
sdaqrrlglavvwlwflgmmimavglhwagllnvprrayiaqvpdayphaavpmvfnvla
givllvalllfiyglfsvllsrerkpelaeaplpfaevisgpedrrlvlamdrigfwfav
aailvvlaygptlvqlfghlnpvpgwrlw

    Sequence, based on observed residues (ATOM records): (download) 
    >3s8fA (A:)
srvyeaypekkatlyflvlgflalivgslfgpfqalnygnvdaypllkrllpfvqsyyqg
ltlhgvlnaivftqlfaqaimvylparelnmrpnmglmwlswwmafiglvvaalpllane
atvlytfypplkghwafylgasvfvlstwvsiyivldlwrrwkaanpgkvtplvtymavv
fwlmwflaslglvleavlfllpwsfglvegvdplvartlfwwtghpivyfwllpayaiiy
tilpkqaggklvsdpmarlafllflllstpvgfhhqfadpgidptwkmihsvltlfvavp
slmtaftvaaslefagrlrggrglfgwiralpwdnpafvapvlgllgfipggaggivnas
ftldyvvhntawvpghfhlqvaslvtltamgslywllpnltgkpisdaqrrlglavvwlw
flgmmimavglhwagllnvprrayiaqvpdayphaavpmvfnvlagivllvalllfiygl
fsvllsrerkpelaeaplpfaevisgpedrrlvlamdrigfwfavaailvvlaygptlvq
lfghlnpvpgwrlw

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3s8fB (B:)
mvdehkahkailayekgwlafslamlfvfialiaytlathtagvipagklervdpttvrq
egpwadpaqavvqtgpnqytvyvlafafgyqpnpievpqgaeivfkitspdvihgfhveg
tninvevlpgevstvrytfkrpgeyriicnqycglghqnmfgtivvke

    Sequence, based on observed residues (ATOM records): (download) 
    >3s8fB (B:)
dehkahkailayekgwlafslamlfvfialiaytlathtagvipagklervdpttvrqeg
pwadpaqavvqtgpnqytvyvlafafgyqpnpievpqgaeivfkitspdvihgfhvegtn
invevlpgevstvrytfkrpgeyriicnqycglghqnmfgtivvke

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3s8fC (C:)
meekpkgalavilvltltilvfwlgvyavffarg

    Sequence, based on observed residues (ATOM records): (download) 
    >3s8fC (C:)
kpkgalavilvltltilvfwlgvyavffarg