PDB entry 3s6c

View 3s6c on RCSB PDB site
Description: Structure of human CD1e
Class: immune system, lipid binding protein
Keywords: MHC, IMMUNOGLOBULIN DOMAIN, IMMUNE SYSTEM, ANTIGEN PRESENTATION, N-glycosylation, intracellular, LIPID BINDING PROTEIN
Deposited on 2011-05-25, released 2011-07-20
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-08-31, with a file datestamp of 2011-08-26.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.243
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-2-microglobulin, T-cell surface glycoprotein CD1e, membrane-associated
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M, CD1E
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (0-98)
      • linker (99)
    • Uniprot P15812 (Start-385)
      • see remark 999 (188)
      • expression tag (386-390)
    Domains in SCOPe 2.06: d3s6ca1, d3s6ca2, d3s6ca3, d3s6ca4
  • Heterogens: GOL

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3s6cA (A:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmddddkgssssddddkeeqlsf
rmlqtssfanhswahsegsgwlgdlqthgwdtvlgtirflkpwshgnfskqelknlqslf
qlyfhsfirivqasagqfqleypfeiqilagcrmnapqiflnmayqgsdflsfqgiswep
spgagiraqnickvlnryldikeilqsllghtcprflaglmeageselkrkvkpeawlsc
gpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqrgtqrgdvlpnadetwylratldvaa
geaaglscrvkhsslgghdliihwggenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >3s6cA (A:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmdqlsfrmlqtssfanhswahs
egsgwlgdlqthgwdtvlgtirflkpwshgnfskqelknlqslfqlyfhsfirivqasag
qfqleypfeiqilagcrmnapqiflnmayqgsdflsfswepspgagiraqnickvlnryl
dikeilqsllghtcprflaglmeageselkrkvkpeawlscgpspgpgrlqlvchvsgfy
pkpvwvmwmrgeqeqrgtqrgdvlpnadetwylratldvaageaaglscrvkhsslgghd
liihwggenlyf