PDB entry 3s6c
View 3s6c on RCSB PDB site
Description: Structure of human CD1e
Class: immune system, lipid binding protein
Keywords: MHC, IMMUNOGLOBULIN DOMAIN, IMMUNE SYSTEM, ANTIGEN PRESENTATION, N-glycosylation, intracellular, LIPID BINDING PROTEIN
Deposited on
2011-05-25, released
2011-07-20
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-08-31, with a file datestamp of
2011-08-26.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.243
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Beta-2-microglobulin, T-cell surface glycoprotein CD1e, membrane-associated
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CD1E
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (0-98)
- Uniprot P15812 (Start-385)
- see remark 999 (188)
- expression tag (386-390)
Domains in SCOPe 2.05: d3s6ca1, d3s6ca2, d3s6ca3 - Heterogens: GOL
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3s6cA (A:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmddddkgssssddddkeeqlsf
rmlqtssfanhswahsegsgwlgdlqthgwdtvlgtirflkpwshgnfskqelknlqslf
qlyfhsfirivqasagqfqleypfeiqilagcrmnapqiflnmayqgsdflsfqgiswep
spgagiraqnickvlnryldikeilqsllghtcprflaglmeageselkrkvkpeawlsc
gpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqrgtqrgdvlpnadetwylratldvaa
geaaglscrvkhsslgghdliihwggenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3s6cA (A:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmdqlsfrmlqtssfanhswahs
egsgwlgdlqthgwdtvlgtirflkpwshgnfskqelknlqslfqlyfhsfirivqasag
qfqleypfeiqilagcrmnapqiflnmayqgsdflsfswepspgagiraqnickvlnryl
dikeilqsllghtcprflaglmeageselkrkvkpeawlscgpspgpgrlqlvchvsgfy
pkpvwvmwmrgeqeqrgtqrgdvlpnadetwylratldvaageaaglscrvkhsslgghd
liihwggenlyf