PDB entry 3s48
View 3s48 on RCSB PDB site
Description: Human Alpha-Haemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus
Class: oxygen transport/protein binding
Keywords: haemoglobin, NEAT domain, IsdH, protein-protein complex, host-pathogen interaction, OXYGEN TRANSPORT-PROTEIN BINDING complex
Deposited on
2011-05-19, released
2012-05-23
The last revision prior to the SCOPe 2.06 freeze date was dated
2014-08-20, with a file datestamp of
2014-08-15.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: 0.242
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Iron-regulated surface determinant protein H
Species: Staphylococcus aureus [TaxId:282459]
Gene: IsdH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3s48a_ - Chain 'B':
Compound: Iron-regulated surface determinant protein H
Species: Staphylococcus aureus [TaxId:282459]
Gene: IsdH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3s48b_ - Chain 'C':
Compound: Hemoglobin subunit alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3s48c_ - Chain 'D':
Compound: Hemoglobin subunit alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3s48d_ - Heterogens: HEM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3s48A (A:)
gsshhhhhhssglvprgshmadeslkdaikdpalenkehdigpreqvnfqlldknnetqy
yhffsikdpadvyytkkkaeveldintastwkkfevyennqklpvrlvsyspvpedhayi
rfpvsdgtqelkivsstqiddgeetnydytklvfakpiyndpsl
Sequence, based on observed residues (ATOM records): (download)
>3s48A (A:)
deslkdaikdpalenkehdigpreqvnfqlldknnetqyyhffsikdpadvyytkkkaev
eldintastwkkfevyennqklpvrlvsyspvpedhayirfpvsdgtqelkivsstqidd
geetnydytklvfakpiyndpsl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3s48B (B:)
gsshhhhhhssglvprgshmadeslkdaikdpalenkehdigpreqvnfqlldknnetqy
yhffsikdpadvyytkkkaeveldintastwkkfevyennqklpvrlvsyspvpedhayi
rfpvsdgtqelkivsstqiddgeetnydytklvfakpiyndpsl
Sequence, based on observed residues (ATOM records): (download)
>3s48B (B:)
deslkdaikdpalenkehdigpreqvnfqlldknnetqyyhffsikdpadvyytkkkaev
eldintastwkkfevyennqklpvrlvsyspvpedhayirfpvsdgtqelkivsstqidd
geetnydytklvfakpiyndp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3s48C (C:)
vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
vhasldkflasvstvltskyr
Sequence, based on observed residues (ATOM records): (download)
>3s48C (C:)
lspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgkk
vadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpav
hasldkflasvstvltsk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3s48D (D:)
vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
vhasldkflasvstvltskyr
Sequence, based on observed residues (ATOM records): (download)
>3s48D (D:)
vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
vhasldkflasvstvltsky