PDB entry 3s48

View 3s48 on RCSB PDB site
Description: Human Alpha-Haemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus
Class: oxygen transport/protein binding
Keywords: haemoglobin, NEAT domain, IsdH, protein-protein complex, host-pathogen interaction, OXYGEN TRANSPORT-PROTEIN BINDING complex
Deposited on 2011-05-19, released 2012-05-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-08-20, with a file datestamp of 2014-08-15.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: 0.242
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Iron-regulated surface determinant protein H
    Species: Staphylococcus aureus [TaxId:282459]
    Gene: IsdH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3s48a_
  • Chain 'B':
    Compound: Iron-regulated surface determinant protein H
    Species: Staphylococcus aureus [TaxId:282459]
    Gene: IsdH
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3s48b_
  • Chain 'C':
    Compound: Hemoglobin subunit alpha
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3s48c_
  • Chain 'D':
    Compound: Hemoglobin subunit alpha
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3s48d_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3s48A (A:)
    gsshhhhhhssglvprgshmadeslkdaikdpalenkehdigpreqvnfqlldknnetqy
    yhffsikdpadvyytkkkaeveldintastwkkfevyennqklpvrlvsyspvpedhayi
    rfpvsdgtqelkivsstqiddgeetnydytklvfakpiyndpsl
    

    Sequence, based on observed residues (ATOM records): (download)
    >3s48A (A:)
    deslkdaikdpalenkehdigpreqvnfqlldknnetqyyhffsikdpadvyytkkkaev
    eldintastwkkfevyennqklpvrlvsyspvpedhayirfpvsdgtqelkivsstqidd
    geetnydytklvfakpiyndpsl
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3s48B (B:)
    gsshhhhhhssglvprgshmadeslkdaikdpalenkehdigpreqvnfqlldknnetqy
    yhffsikdpadvyytkkkaeveldintastwkkfevyennqklpvrlvsyspvpedhayi
    rfpvsdgtqelkivsstqiddgeetnydytklvfakpiyndpsl
    

    Sequence, based on observed residues (ATOM records): (download)
    >3s48B (B:)
    deslkdaikdpalenkehdigpreqvnfqlldknnetqyyhffsikdpadvyytkkkaev
    eldintastwkkfevyennqklpvrlvsyspvpedhayirfpvsdgtqelkivsstqidd
    geetnydytklvfakpiyndp
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3s48C (C:)
    vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
    kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
    vhasldkflasvstvltskyr
    

    Sequence, based on observed residues (ATOM records): (download)
    >3s48C (C:)
    lspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgkk
    vadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpav
    hasldkflasvstvltsk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3s48D (D:)
    vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
    kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
    vhasldkflasvstvltskyr
    

    Sequence, based on observed residues (ATOM records): (download)
    >3s48D (D:)
    vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
    kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
    vhasldkflasvstvltsky