PDB entry 3rgv

View 3rgv on RCSB PDB site
Description: A single TCR bound to MHCI and MHC II reveals switchable TCR conformers
Class: immune system
Keywords: TCR, MHC, MHC class I, IMMUNE SYSTEM
Deposited on 2011-04-09, released 2011-07-20
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-08-03, with a file datestamp of 2011-07-29.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.205
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Yae62 TCR a chain
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 3RGV (0-199)
    Domains in SCOPe 2.06: d3rgva1, d3rgva2
  • Chain 'B':
    Compound: Yae62 TCR b chain
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 3RGV (0-235)
    Domains in SCOPe 2.06: d3rgvb1, d3rgvb2
  • Chain 'C':
    Compound: h-2 class I histocompatibility antigen, k-b alpha chain
    Species: Mus musculus [TaxId:10090]
    Gene: H2-K1, H2-K
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01901 (0-274)
      • engineered mutation (83)
      • engineered mutation (120)
    Domains in SCOPe 2.06: d3rgvc1, d3rgvc2
  • Chain 'D':
    Compound: Beta-2-microglobulin
    Species: Mus musculus [TaxId:10090]
    Gene: B2M
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01887 (1-99)
      • expression tag (0)
    Domains in SCOPe 2.06: d3rgvd1, d3rgvd2
  • Chain 'E':
    Compound: peptide
    Species: Mus musculus [TaxId:10090]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 3RGV (0-12)

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3rgvA (A:)
    dsvtqmqgqvtlsendflfinctysttgyptlfwyvqysgegpqlllqvttannkgssrg
    featydkgttsfhlqktsvqeidsavyycaansgtyqrfgtgtklqvvpniqnpdpavyq
    lrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdf
    acanafnnsiipedtffpsp
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3rgvB (B:)
    avtqsprnkvavtggkvtlscnqtnnhnnmywyrqdtghglrlihysygagstekgdipd
    gykasrpsqenfslilelatpsqtsvyfcasgdfwgdtlyfgagtrlsvledlknvfppe
    vavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpaln
    dsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3rgvC (C:)
    gphslryfvtavsrpglgeprymevgyvddtefvrfdsdaenpryeprarwmeqegpeyw
    eretqkakgneqsfrvdlrtllgcynqskggshtiqvisgcevgsdgrllrgyqqyaydg
    sdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
    rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
    fqkwasvvvplgkeqyytchvyhqglpepltlrwe
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3rgvD (D:)
    giqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskd
    wsfyilahteftptetdtyacrvkhdsmaepktvywdrdm
    

  • Chain 'E':
    No sequence available.